| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1009 |
|---|
| Symbol | phoR |
|---|
| ID | 8131938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 1179432 |
|---|
| End bp | 1180754 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644864292 |
|---|
| Product | phosphate regulon sensor protein |
|---|
| Protein accession | YP_003016594 |
|---|
| Protein GI | 253687404 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGAAC GTTTATCCTG GAAAAGGCTG GCATTGGAGC TGGCTTTTTT TTGTTTGCCC
GCGTTGTTAC TGGGGCTGAT TTTTGGCTAT CTGCCCTGGT TTCTGCTGGT CGCCGTATTA
GGCTTACTCT GCTGGAATTT TTATAACCAG CTGAAACTCT CTTATTGGCT GTGGGTTGAC
CGCAGTATGA CGCCACCGCC CGGTCGTTGG AGCTGGGAGC CGCTGTTTTA CGGGCTTTAC
CAGATGCAAC TGCGTAACCG GCGCCGACGC CGTGAACTGG CGCTCCTGAT CAAACGCTTT
CGCAGCGGGG CCGAATCCCT ACCGGATGCT GTAGTTATCA CCACCGAAGA AGGAACCATC
TTCTGGTGTA ATCATCTGGC GCAGCACTTG CTCAATTTCC GCTGGCCGGA GGATAACGGT
CAGAATATCC TCAACTTACT ACGTTACCCC GAATTCACTA ATTACATGAA AGGGCAAGAT
TTTAGCCGTC CTCTCACGTT GCAGCTGAAT AATTCCCACC ATGTTGAATT TCGCGTGATG
CCTTATTCCG AAGGGCAGCT ATTGATGGTC GTGCGTGATA TTACGCAGAT GCACCAGCTC
GAAGGCGCCA GACGTAACTT CTTTGCCAAT GTGAGCCATG AACTGCGTAC GCCGCTGACG
GTGTTGCAGG GCTATCTGGA AATGATGCAG GAAGAAACGT TGGATGCGGC GCTGCGCGGA
AAAGCGCTGA ATACCATGCA GGAACAGACC CGGCGTATGG ACGGGCTGGT CAAACAACTG
CTGACCTTGT CCCGTATTGA AGCGGCGACG GCGATCGATT TGAATGAAAA AGTCGATATT
CCATTGATGC TGCGTGTGTT GCAGCGTGAA GCGCAGACCC TGAGTCAGGG GCGCCATGAG
ATCGTCTTTC GTGTGAACGA AAATCTTCGC GTGTTTGGTA ATGAAGAACA GCTGCGCAGC
GCGGTATCCA ATCTGGTGTA TAACGCGATC AACCATACGC CAGCGGGAAC GCGTATCGAA
GTCTGCTGGC AGAAGATCCC GCAGGGGGCG CAATTTCAGG TCAGCGATAA CGGGCCGGGC
ATTGCGGCCG AGCATTTGCC GCGCCTGACT GAGCGCTTTT ACCGGGTCGA TAAGGCGCGT
TCACGCCAGA CAGGCGGCAG TGGCCTGGGG CTGGCGATTG TTAAGCATGC GCTCAGCCAC
CACGATTCCC GTCTGGAAAT CATGAGTGAG GATGGTTTGG GCTCGCGTTT TGTCTTTACG
TTGCCGAATC GGTTGATTGT CCCTGCCTCT CTGGCTGAAA ATACGGTGAA ACCTTCGGCC
TGA
|
|---|
| Protein sequence | MLERLSWKRL ALELAFFCLP ALLLGLIFGY LPWFLLVAVL GLLCWNFYNQ LKLSYWLWVD
RSMTPPPGRW SWEPLFYGLY QMQLRNRRRR RELALLIKRF RSGAESLPDA VVITTEEGTI
FWCNHLAQHL LNFRWPEDNG QNILNLLRYP EFTNYMKGQD FSRPLTLQLN NSHHVEFRVM
PYSEGQLLMV VRDITQMHQL EGARRNFFAN VSHELRTPLT VLQGYLEMMQ EETLDAALRG
KALNTMQEQT RRMDGLVKQL LTLSRIEAAT AIDLNEKVDI PLMLRVLQRE AQTLSQGRHE
IVFRVNENLR VFGNEEQLRS AVSNLVYNAI NHTPAGTRIE VCWQKIPQGA QFQVSDNGPG
IAAEHLPRLT ERFYRVDKAR SRQTGGSGLG LAIVKHALSH HDSRLEIMSE DGLGSRFVFT
LPNRLIVPAS LAENTVKPSA
|
|---|
| |