| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0956 |
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| Symbol | dnaE |
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| ID | 8131885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1105664 |
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| End bp | 1109146 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864240 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_003016542 |
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| Protein GI | 253687352 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.582605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAC CACGTTTTGT TCACCTGCGT GTTCACAGTG ACTATTCCAT GATCGATGGG
CTGGCTAAAG TCGGTCCGCT GGTAAAAAAA GCGGCGGCAC TTGGCATGCC AGCGCTGGCG
ATTACCGATT TCACCAACCT GTGTGGGCTG GTTAAGTTCT ATGGTGGCGC GCATGGCGCG
GGCATCAAGC CTATTATCGG CGCAGACTTC TGTGTCGAAA GCGACGAATT AGGGGATGAA
CTCGCGCATC TCACTATCTT GGCCATGAAT AATGAAGGCT ACCAGAATCT CACGCTGCTG
ATTTCTCAGG CTTACCAGCG GGGTTATGGT GCTGCCGGGC CGACAATTGA CCGGAATTGG
CTGATTGAGC ATCGTGAAGG ACTGATTTTA CTGTCTGGTG GTCGCCGGGG TGATGTTGGT
CGATTCTTGC TGCGCGGCAA CCAGACACAG GCCGAGCAGT GTCTGGCGTT TTATCAAGAG
TACTTCCCCC AGCGTTACTA TCTGGAACTT ATCCGCACGT CACGCCCCGA CGAAGAAAGC
TATTTGCACG CTGCCGTCGA GTTGGCAACG AAGCACGGGT TGCCCGTGGT GGCGACCAAT
GAAGTGTGTT TTATCAGCAC CGATGATTTT GACGCTCACG AAATCCGCGT TGCTATCCAC
GATGGCTACA CGCTTGACGA CCCTAAACGC CCACGTAATT ACAGCCCGCA GCAGTACATG
CGTTCCGAAG AGGAAATGTG CGAGCTCTTT GCGGATATCC CCGAAGCGCT GGCGAACAGC
GTGGAAATTG CCAAGCGTTG TAACGTAACG ATTCGTCTGG GTGAATATTT CCTGCCGCAG
TTCCCGACGG GTGACATGAC CACGGAAGAC TTTCTGGTTG AGTGCTCGAA AAAGGGGCTG
GAAGAGCGCC TCGAATTCCT GTTCCCTGAC CCGGAAGTGC GCGCTGCGCG GCGACCAGAG
TACGATGAGC GTCTGGATAT TGAACTGGGC GTGATTAACC AGATGGGGTT CCCCGGTTAC
TTCCTCATCG TAATGGAATT TATTCAATGG TCGAAGGATA ACGACGTACC TGTTGGGCCG
GGGCGTGGTT CCGGTGCTGG GTCGCTGGTG GCCTATGCGC TGAAAATCAC CGATCTGGAT
CCGCTGGAAT TCGACCTGCT GTTCGAACGT TTCCTCAACC CTGAACGTGT TTCCATGCCT
GACTTCGACG TCGATTTCTG TATGGAAAAA CGCGATAAAG TGATCGATCA CGTTGCGGAA
ATGTACGGTC GTGATGCGGT ATCACAGATT ATTACCTTCG GTACGATGGC GGCGAAAGCG
GTTATTCGTG ACGTAGGGCG CGTGCTTGGG CACCCATATG GGTTTGTCGA TCGTATTTCA
AAACTGGTGC CGCCCGATCC GGGTATGACG CTGGAAAAAG CCTTTGCCGC TGAGCCGCAG
CTGCCGGAAA TTTATGAGGC CGATGAGGAA GTTAAGGCCC TCATTGATAT GGCGCGCAAG
CTCGAAGGGG TAACGCGTAA CGCCGGTAAA CATGCGGGTG GGGTGGTGAT TTCCCCCACC
AAGATTACCG ATTTCGCGCC GCTGTACTGC GATGCAGAAG GGAACCACCC GGTTACCCAG
TTTGATAAGA ACGACGTGGA ATATGCCGGA CTGGTGAAGT TCGACTTCCT TGGCCTGCGT
ACGCTGACCA TCATCGACTG GGCGCTGGAG ATGATTAACG CCCGTCGCGC GAAGCAAGGT
CAGGAGCCGA TTGATATCGC GGCCATTCCG CTCGACGATA AGAAAAGTTT CGACATGCTG
CAACGCTCGG AAACCACGGC GGTATTCCAG CTTGAATCGC GCGGCATGAA AGACCTGATC
AAACGACTGA AGCCTGACTG CTTTGAAGAT ATGATCGCTC TGGTGGCGCT GTTCCGCCCC
GGCCCGCTGC AATCCGGCAT GGTGGATAAC TTCATCGACC GTAAGCATGG CCGTGAAGCG
ATCTCCTATC CTGATATCGA ATGGCAGCAC GAGTCACTCA AGCCTGTGTT GGAGCCGACC
TACGGCATTA TCCTGTATCA GGAACAGGTT ATGCAGATCG CTCAGGTACT GGCGGGCTAT
ACGCTGGGCG GTGCGGACAT GCTGCGTCGT GCGATGGGGA AAAAGAACCC GGTCGAAATG
GCAAAGCAGC GTGGTGGCTT TGAAGATGGT GCCAAAGCTC GCGGCGTGAA CGGCGAACTG
GCTGTTAAAA TTTTCGACCT GGTGGAAAAA TTCGCCGGTT ACGGCTTTAA TAAATCGCAC
TCTGCGGCTT ATGCGCTGGT GTCTTACCAG ACGCTGTGGC TGAAGGCGCA CTATCCGGCT
GAATTCATGG CGGCGGTAAT GACGGCCGAT ATGGACAACA CGGATAAAGT GGTCGGGCTG
GTTGATGAAT GCTGGCGGAT GGGGTTAAAA ATCTTGCCTC CGGACATCAA CAGCGGTCTG
TATCACTTCC ACGTGAACGA CGATGGCGAG ATTGTTTACG GCATCGGCGC GATTAAAGGC
GTGGGTGAAG GCCCGATAGA GGCGATTATC GAGGCGCGTA ATCAGGGCGG CTATTTTAGA
GAACTGTTTG ACCTCTGTGC GCGTACCGAC ATTAAAAAGC TGAACCGCCG CGTGCTGGAA
AAACTGATCA TGTCCGGGGC CTTTGACCGC CTGGGGCCGC ACCGTGCCGC GCTGATGAAT
TCATTAGCTG ATGCGTTGAA GGCCGCCGAT CAGCATGCGA AAGCGGAAGC CATTGGTCAG
GTGGATATGT TTGGCGTGCT GGCCGAGGCA CCCGAGCAGG TTGAACAATC CTACAGCACC
GTGCCTCCGT GGCCGGAGCA GGTCGTATTG GATGGTGAGC GGGAAACGCT GGGGCTGTAC
CTGACCGGCC ACCCGATCAC GCAATATATT AAGGAAATCG AACGCTATGC CGGTGGCGTG
CGTTTGAAAG ATATGCACCC GACGGATCGG GGTAAAATGA CCACTGCCGT TGGGCTGGTG
TTGGCGGCTC GCGTCATGGT AACCAAGCGG GGTAACCGTA TTGGTGTCTG TACCTTGGAC
GATCGTTCCG GTCGGCTTGA GATAATGCTG TTTACCGATG CATTGGAAAA ATATCAGCAT
TTACTTGAGA AAGACCGTAT CCTTATCGCC AGTGGACAGG TCAGCTTTGA TGACTTCAGC
GGCGGGCTTA AAATGACCGT CCGAGAGTTA ATGGATATCA GTGAAGCGCG GGAAAAATAC
GCGCGCGGGC TTGCTATCTC GCTGACTGAC AGGCAAATTG ATGACCAGCT ATTAAACCGT
CTCCGCCAAT CGTTGGAACC CCATCGATCG GGGACGATCC CAGTGCATCT CTATTACCAG
CGTGAAGATG CGCGCGCCCG ACTACGTTTC GGTGCAGCAT GGCGTGTAAC GCCTGCCGAT
GCGCTACTGA ACGAGCTGCG CACATTAGTG GGTAATGAGC AGGTGGAACT GGAATTTGAC
TAA
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| Protein sequence | MAEPRFVHLR VHSDYSMIDG LAKVGPLVKK AAALGMPALA ITDFTNLCGL VKFYGGAHGA
GIKPIIGADF CVESDELGDE LAHLTILAMN NEGYQNLTLL ISQAYQRGYG AAGPTIDRNW
LIEHREGLIL LSGGRRGDVG RFLLRGNQTQ AEQCLAFYQE YFPQRYYLEL IRTSRPDEES
YLHAAVELAT KHGLPVVATN EVCFISTDDF DAHEIRVAIH DGYTLDDPKR PRNYSPQQYM
RSEEEMCELF ADIPEALANS VEIAKRCNVT IRLGEYFLPQ FPTGDMTTED FLVECSKKGL
EERLEFLFPD PEVRAARRPE YDERLDIELG VINQMGFPGY FLIVMEFIQW SKDNDVPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMEK RDKVIDHVAE
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLVPPDPGMT LEKAFAAEPQ
LPEIYEADEE VKALIDMARK LEGVTRNAGK HAGGVVISPT KITDFAPLYC DAEGNHPVTQ
FDKNDVEYAG LVKFDFLGLR TLTIIDWALE MINARRAKQG QEPIDIAAIP LDDKKSFDML
QRSETTAVFQ LESRGMKDLI KRLKPDCFED MIALVALFRP GPLQSGMVDN FIDRKHGREA
ISYPDIEWQH ESLKPVLEPT YGIILYQEQV MQIAQVLAGY TLGGADMLRR AMGKKNPVEM
AKQRGGFEDG AKARGVNGEL AVKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKAHYPA
EFMAAVMTAD MDNTDKVVGL VDECWRMGLK ILPPDINSGL YHFHVNDDGE IVYGIGAIKG
VGEGPIEAII EARNQGGYFR ELFDLCARTD IKKLNRRVLE KLIMSGAFDR LGPHRAALMN
SLADALKAAD QHAKAEAIGQ VDMFGVLAEA PEQVEQSYST VPPWPEQVVL DGERETLGLY
LTGHPITQYI KEIERYAGGV RLKDMHPTDR GKMTTAVGLV LAARVMVTKR GNRIGVCTLD
DRSGRLEIML FTDALEKYQH LLEKDRILIA SGQVSFDDFS GGLKMTVREL MDISEAREKY
ARGLAISLTD RQIDDQLLNR LRQSLEPHRS GTIPVHLYYQ REDARARLRF GAAWRVTPAD
ALLNELRTLV GNEQVELEFD
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