Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0951 |
Symbol | lpxD |
ID | 8131880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1101419 |
End bp | 1102441 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644864235 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_003016537 |
Protein GI | 253687347 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00013208 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCAA TTCGACTGGA CGCGTTAGCT CAACAGTTGG ATGCACAATT ACACGGTGAT GGCGATATCG TCATCACCGG TGTTGCTTCT ATGCATTCAG CAAAAACTGG GCAAATTACG TTTCTTTCCG ACAGTCGTTA CCGTGAGCAA CTGGCTGGGA CGCAAGCGTC AGCGGTTGTG CTGACGGAAG CGGATTTACC TTACTGTCAG GTTGCTGCGC TGGTAGTGAA AAATCCCTAT CTTACCTATG CGCGCATGGC ACAGCTGCTT GATACCACGC CACAGCCGGC AACCGATATT GCGCCGAGCG CGGTTATTGC GCCAGACGCG ACGCTGGGGC AGCAGGTATC CGTTGGTGCA AATGCCGTCA TCGAATCTGG CGCACAGTTG GGTGATGGTG TTGTCATTGG TCCCGGCTGC TTCATCGGCA AAGATGCCCG CATTGGTGCC GGTACCCGTT TGTGGGCAAA TGTAACGATT TATCACCGCG TTGAGCTGGG TGAGCATTGC CTAATCCAGT CGGGAACGGT TATCGGTTCA GACGGTTTTG GTTATGCCAA CGATCGCGGT AACTGGGTGA AAATCCCGCA GTTAGGCACG GTTAGAATTG GCGATCGAGT TGAGATCGGC GCAAGCACGA CCATCGATCG TGGCGCGTTG GATGATACGG TCATTGGCAA TGGTGTTATC ATTGATAACC AATGTCAGAT TGCGCACAAC GTCGTGATTG GCGACAATAC CGCGGTAGCG GGTGGCGTCA TTATGGCGGG GAGCTTGAAA ATTGGTCGTT ATTGCATGAT CGGCGGTGCC AGCGTAATCA ACGGGCACAT GGAGATTTGC GATAAAGTGA CGGTAACGGG AATGGGGATG GTCATGCGAC CAATCACAGA ACCTGGGGTA TACTCTTCGG GCATTCCTTT GCAACCCAAT AAAGTATGGC GTAAAACCGC AGCGCTGGTG ATGAATATTG ATGAGATAAG CAAACGGTTG AAAGCCGTTG AACGAAAAGT CGATAACGTT TAA
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Protein sequence | MYSIRLDALA QQLDAQLHGD GDIVITGVAS MHSAKTGQIT FLSDSRYREQ LAGTQASAVV LTEADLPYCQ VAALVVKNPY LTYARMAQLL DTTPQPATDI APSAVIAPDA TLGQQVSVGA NAVIESGAQL GDGVVIGPGC FIGKDARIGA GTRLWANVTI YHRVELGEHC LIQSGTVIGS DGFGYANDRG NWVKIPQLGT VRIGDRVEIG ASTTIDRGAL DDTVIGNGVI IDNQCQIAHN VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV YSSGIPLQPN KVWRKTAALV MNIDEISKRL KAVERKVDNV
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