Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0934 |
Symbol | |
ID | 8131863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1083237 |
End bp | 1083587 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864218 |
Product | hypothetical protein |
Protein accession | YP_003016520 |
Protein GI | 253687330 |
COG category | [S] Function unknown |
COG ID | [COG3098] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000280487 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAG AGAATCAGGT CCGTCAGTCA TTATTCGATA TTGAGCGCGC ATTGAGAGAA AGTCCTTTCT GGCAGGTTGT TCCGCCGGAA GATGAGGCGT TTAACAGCAC GGAGCCTTTC AGCCTGGATA CCATGAAACC CGAAGAGTGG TTGCAGTGGG TCTTTTTGCC GCGCATGCAT GCCTTGTTGG ATAGCGAATT AGCGCTGCCC GCTGAGCTGG CTTTACTTCC CTATTTTGAA GAAGCGCTGG AAGGCACGCC AGAAGAGACG GCGGCGATCC TGTTGCGTAT CGGGCTGCTT GATGAACTGT TCCGCCCGGA TGCACAGGAT GGCGCAGTAC ACGATGCTTG A
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Protein sequence | MSRENQVRQS LFDIERALRE SPFWQVVPPE DEAFNSTEPF SLDTMKPEEW LQWVFLPRMH ALLDSELALP AELALLPYFE EALEGTPEET AAILLRIGLL DELFRPDAQD GAVHDA
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