Gene PC1_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0924 
Symbol 
ID8131853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1073088 
End bp1073543 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content54% 
IMG OID644864208 
Productcysteine desulfurase, sulfur acceptor subunit CsdE 
Protein accessionYP_003016510 
Protein GI253687320 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID[TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0457641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGA CAACTGACAC CACGCATCCT TTCGGCCACC ACATCACCGT CGCCGATCTA 
CTGGCGCGCT TCGATACCTG TCGCGCATGG GAAGATCGCT ATCGGCAACT CATTTTGTTG 
GCAAAGGCGC TGCCAACGCT GCCAGATGCA CTAAAAACCG AGGATATTTC GTTATCCGGT 
TGTGAAAATC GCGTCTGGCT GGGTTATCAA CGCCAAGAGG ACGACAGGCT ACATTTTTAC 
GGTGATAGCG ATGGGCGTAT CGTGCGGGGA TTACTGGCGG TGTTGTTAAC CGCCGTTGAG 
GGAAAAACGC CAGAAACGCT ATTACAGCAC GATCCGCTGG CGATCTTTGA CATGCTGGGG 
TTACGCGCTC AGCTCAGCGC TTCACGTTCA AGCGGGCTGG CAGCGCTGGC CGCAAGAATC 
AGGGACATTG CAGAACAAGA AGCTGCGGAT AAGTAG
 
Protein sequence
MNETTDTTHP FGHHITVADL LARFDTCRAW EDRYRQLILL AKALPTLPDA LKTEDISLSG 
CENRVWLGYQ RQEDDRLHFY GDSDGRIVRG LLAVLLTAVE GKTPETLLQH DPLAIFDMLG 
LRAQLSASRS SGLAALAARI RDIAEQEAAD K