Gene PC1_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0895 
Symbol 
ID8131821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1036453 
End bp1037385 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content51% 
IMG OID644864176 
Productphosphonate ABC transporter, periplasmic phosphonate binding protein 
Protein accessionYP_003016481 
Protein GI253687291 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA TCTTTGATTT GGCGATGATG TTAACCAGTT CACTGACCGT CTTCAGCGCC 
ACGGCGGCGG GAATGCCGAA AGAGCTGAAT CTGGGGATTT TGGGCGGGCA AAATGCGACA 
CAGCAGATCG GTGATAATCA GTGCGTCAAA CAGTTCCTTG ATAAAGAGTT AGGGGTTGAG 
ACTCGGTTGC GTAACGCTTC TGACTACTCC GGCGTCATTC AGGGTTTACT GGGAGGAAAA 
GTCGATCTGG TTCTGAGCAT GTCGCCATCG TCTTTCGCCT CCGTCTATCT GAAAGATCCT 
AATGCGGTGG ATATTGTCGG TATTGCAGTT GACGATAAAG ACCAGTCGCG CGGCTACTAC 
TCTGTGGTGG TGGTCAAAGC CGACAGCTCC TACAAAAAAC TGGAAGACCT GAAAGGGAAA 
TCCTTTGGCT TTGCCGATCC CGATTCAACC TCGGGGTTTC TGGTGCCCAA TCAGGTATTC 
AAACAGAAGT TTGGTGGGAA CAACGACAAC AAATACAACA ATTTCTTTTC CAGCGTGACG 
TTCTCTGGCG GCCATGAGCA GGACATTCTG GGCGTACTGA ACGGCCAATT TGACGGTGCT 
GTCGCCTGGA CATCGATGGT GGGCGATTAC AACACGGGAT ATACCGCTGG CGCGTTTACC 
CGCCTGATCC GCATGGATCA CCCGAACCTG ATGCAGCAAC TCCGTATTAT CTGGAAATCT 
CCGATGATCC CGAATGGGCC GATTTTGGTC AGCAACAAGC TCCCCGCGGA TTTCAAACAG 
AAGGTCATTA CTGCGGTGAT GAAGTTGGAT AAAGAACAGC ATGAATGCTT TGTTAAAGCG 
ATGGGCGGTA CTCAGCACAT CGGTCCGGCA AGCCTGAATG ACTACAAACA CATCATCGAC 
ATGAAACGCG AACTGACGAA AGGCAGCCGC TGA
 
Protein sequence
MRKIFDLAMM LTSSLTVFSA TAAGMPKELN LGILGGQNAT QQIGDNQCVK QFLDKELGVE 
TRLRNASDYS GVIQGLLGGK VDLVLSMSPS SFASVYLKDP NAVDIVGIAV DDKDQSRGYY 
SVVVVKADSS YKKLEDLKGK SFGFADPDST SGFLVPNQVF KQKFGGNNDN KYNNFFSSVT 
FSGGHEQDIL GVLNGQFDGA VAWTSMVGDY NTGYTAGAFT RLIRMDHPNL MQQLRIIWKS 
PMIPNGPILV SNKLPADFKQ KVITAVMKLD KEQHECFVKA MGGTQHIGPA SLNDYKHIID 
MKRELTKGSR