| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0849 |
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| Symbol | |
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| ID | 8131774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 987593 |
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| End bp | 990589 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864130 |
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| Product | Type III site-specific deoxyribonuclease |
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| Protein accession | YP_003016436 |
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| Protein GI | 253687246 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATC ATTCTCAAAA TACGGGCTTT CAATTTGATT CACATCAGCA ATATCAGCTC
GATGCCATCA ACGCCGTGGT GGATTTGTTC GATGGTCAGC CAAAGGATGC TGACAAGATC
GCGATTGCCT TGCGTGGCAG CGTTGCCAGC CGGGAAGGTG AGCTGGATTT AGGCATCGAG
CAAGTAATTG GTGCTATCGG CAATAATCTG GTGCTGGATG AAGACGCTAT TCTTGCTAAT
TTACAAACGG TACAGGATCG CAACGGGCTG GAGGTCAGCG AAAAACTGGT TGATGGCAAA
CTGGATTTCG ACATCGAAAT GGAAACCGGT ACGGGTAAAA CTTACGTTTA TCTGCGTACC
GTTTTCGAAC TGGCAAAGAA ATATGGCTTC ACCAAATTTA TCATTCTGGT TCCCAGCGTC
GCCATTCGTG AAGGCGTGAA CACCAGTATT CGCCTGATGC GCGATCACTT CCGTAGCCTC
TATCCGGCGC AGCCTTTCGA TGCGAATGTC TACAGAGGCG ACAAGGCCGA GGAAGTACAG
GCTTTTGCTA CTGCAACCAA CGTGCAAATA CTGGTGATGA CGATTGATGC GGTGCGTAGT
GACAAGAATA AAAACGAGAA TAAGCGCATT ATTCACAAAC CTTATGACAA GCTCAATGGC
TTGCGTCCGT TAGATTACCT GAAGGGCACG CATCCCGTGG TGATCATGGA TGAACCACAA
AATATGGAGT CGTTACTGTC GCAGTCGGCA GTGGTCGAGT TCGATCCCGT ATTCACGCTG
CGCTACTCGG CCACGCATAA GCAGCGGAGA AACCAGGTCT ATCGGCTCGA TCCGGTTGAT
GCACACGATC TAGGTCTGGT GAAACAGATC GTCGTGGCTG AAGTTGCACA GCACGGTGCG
GATGTTGCGC CTTACGTCAA ACTACTGGAA GTGAACGACA CGAAAGGTGC GAAACTTGAA
CTGGCTTGCC GCAAGGCCGA TGGCTCCATC GCGCGTCGTA GCAAAAAGGT CAAGCCGCAT
CAGGAATTGT CCGATGTCAC GGGTAATCCG GCTTACAAAG ATTGGCGTAT TAATGCGTTG
AGCATCGCCG CTTTCGGTGA ATCAGCCAGT ATTGAACTGA CGCCGAATGG AAACTTGCTG
CACGAAGGTG AATCCCTGGG GGGCGCAACG GGCGCGGTTT ACAAGGAAAT GATTCGGGAA
ACCGTGCGTG AGCATTTGCG TAAAGAGGCC ATGTTACGCC CGAAAGGGAT CAAGGTGCTG
AGTCTGTTTT TCGTGGACAA GGTGGCAAGC TTCCTCGGCG ACGGGGTAAA CAACGAAGAC
GCTAATGGCG AGTTCGTGAA ATGGTTTGAT GAAGTGTTCA TGGAAGAACG CGGCAAGTCT
GACGTCTACC AAAAATTGCT GCCGCAGGAG CCTTGCGAAT TACGACGAGC CTATTTTTCT
CAACTAAAAA CACGTGGCAG AACAACCTTT GTGGATTCAT CTGGTTCGGC TGTCAAAGAT
GACGATGCCT ACAAACTCAT TATGCAGGAC AAGCAACGCC TGCTGGACAG CGATGAACCC
GTACGCTTCA TCTTTAGCCA TTCCGCATTG CGTGAAGGCT GGGACAACCC CAACGTGTTT
CAGATTTGTA CACTGCGTGA AATGGGCGCG GAAACGGAAC GTCGGCAGAC GCTGGGGCGT
GGTCTGCGCC TGCCGGTAGC GAAAACAGTA AAAGGCTATG AGCGAGTTAC CGACCACAGC
GTTGCACAGC TCACCGTGGT TGCTAACGAA TCTTATGCTA CGTTCGCTCA GAATCTGCAA
GCTGAATACA AAGAGGCGGG TGTTGCCATT GGACAGGTGC GCTCCAATGA ATTTGCCAAA
CTGATGAAAC GGGATATTCA TGGCGTGATG ACCGATGATA TGCTGGGTTT CAAGACATCT
TCTGCCATCT TCAAACATCT GGAAAACGCG GGATTCATCA AGGATGGTAA GACAACTTCC
ATGTTTCTGC CGGATGCAGA AGGATTCTCA TTACATCTAC CTGATGAGCT CAGGCCCTAC
GAATCAGATA TTATCCGGTG CATCCTTAAT GCGGGTATTG AGAAATATGT GAAGCCTGTA
AGTGCGCGGG CTAAGCGTAA ATTCAATAAA GAGCTCTATG CCTCGCCGGA TTTTGAGAGG
CTTTGGAGCG CTATCAGCCA GAAAACTACT TATCGGGTGA CAGTTAAACA CCCTATGCTG
GTTGAGGCGT GTATAAAGGC GATCAAGGCT GAACCCAAAA TCCAGCCGTT ACGTATTGAT
GTCACCCGTG CGGGTGTCAG GGTGCTGCGT GGCGGCACGC AAGGGCAAGA ACTGGGCGCG
CGGACTGTCG ACCTCAAAGG CAGCTATGAC CTGCCGGACA TTATCGGTGA GTTGCAGCAA
GGTACGTCTC TCACGCGCAA GACGCTGGTG GATATTCTCA TCGGTAGCGG CAGGTTGGAC
GAGTTCATTG CCAATCCGAA CGACTTTATG GCGATGGTTC GCCGTTGCGT AGAGGGCGAG
CTACAGCGCG TCATTGTAGA AGGCGTTCAG TATGAAAAGA TCGGCGGCTC CGTCTATGAA
CTCCGTGAGT TGCAAGCCGA CGGCCTTGCT GAAAATGATT TCTTCAAAGA GCATCTTTAC
CGCGTTGAAC ACCCCGAGAA AACTGACTTT GATTATGTCG TGTTCGATGG CAGACCGGAT
AGCCCGGAGC GAAAGTTTGC CGAGTTCCTC GACCACCGTG AGGATATCCG GCTGTTTATG
AAGCTGCCGC CAAGATTCCA GATCGACACG CCGGTTGGCC CCTATAACCC GGACTGGGCT
ATCATCAAAT CCGAAGACGG CGAAGACCGT ATCTATATGG TTCGCGAAAC CAAGAGCACC
ATGGATGAAC AAAAAAGGAG ACCTTCCGAA AATGCCAAAA TCAAGTCTGC CGAGGCACAC
TTCAGAGAAA TTGGCATCGA GTATGCGGTT TCAGTACCTG AACAGTGGAA TATCTGA
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| Protein sequence | MNHHSQNTGF QFDSHQQYQL DAINAVVDLF DGQPKDADKI AIALRGSVAS REGELDLGIE
QVIGAIGNNL VLDEDAILAN LQTVQDRNGL EVSEKLVDGK LDFDIEMETG TGKTYVYLRT
VFELAKKYGF TKFIILVPSV AIREGVNTSI RLMRDHFRSL YPAQPFDANV YRGDKAEEVQ
AFATATNVQI LVMTIDAVRS DKNKNENKRI IHKPYDKLNG LRPLDYLKGT HPVVIMDEPQ
NMESLLSQSA VVEFDPVFTL RYSATHKQRR NQVYRLDPVD AHDLGLVKQI VVAEVAQHGA
DVAPYVKLLE VNDTKGAKLE LACRKADGSI ARRSKKVKPH QELSDVTGNP AYKDWRINAL
SIAAFGESAS IELTPNGNLL HEGESLGGAT GAVYKEMIRE TVREHLRKEA MLRPKGIKVL
SLFFVDKVAS FLGDGVNNED ANGEFVKWFD EVFMEERGKS DVYQKLLPQE PCELRRAYFS
QLKTRGRTTF VDSSGSAVKD DDAYKLIMQD KQRLLDSDEP VRFIFSHSAL REGWDNPNVF
QICTLREMGA ETERRQTLGR GLRLPVAKTV KGYERVTDHS VAQLTVVANE SYATFAQNLQ
AEYKEAGVAI GQVRSNEFAK LMKRDIHGVM TDDMLGFKTS SAIFKHLENA GFIKDGKTTS
MFLPDAEGFS LHLPDELRPY ESDIIRCILN AGIEKYVKPV SARAKRKFNK ELYASPDFER
LWSAISQKTT YRVTVKHPML VEACIKAIKA EPKIQPLRID VTRAGVRVLR GGTQGQELGA
RTVDLKGSYD LPDIIGELQQ GTSLTRKTLV DILIGSGRLD EFIANPNDFM AMVRRCVEGE
LQRVIVEGVQ YEKIGGSVYE LRELQADGLA ENDFFKEHLY RVEHPEKTDF DYVVFDGRPD
SPERKFAEFL DHREDIRLFM KLPPRFQIDT PVGPYNPDWA IIKSEDGEDR IYMVRETKST
MDEQKRRPSE NAKIKSAEAH FREIGIEYAV SVPEQWNI
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