Gene PC1_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0836 
Symbol 
ID8131761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp975129 
End bp975728 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content52% 
IMG OID644864118 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003016424 
Protein GI253687234 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACAT CACAGACCCG ACAGCGTTTA TCGAGAGAAG CGCGCCATGT ACAACTGATC 
AAAGCCGCCT GGCAGATTAT TCGAGAGGAA GGTACGGAAG CGCTGACGCT CGGGCATCTG 
GCGGAACAGG CTGGCGTAAC GAAGCCAGTA GTTTACGATC ACTTTACTAA CCGTTCGGGG 
CTGTTAGCTG CACTTTATAA GGAATATGAC GCTCGCCAGA CGGCGATTAT GGATGACATT 
ATCCGCAAGA CGGAGCCCAT GCTTGATAAG CTGGCCGCCG TCATTGCCAC TTCGTACATC 
GATTGCGTAC TGCTTCAGGG CCGTGAAATG CCCAACGTCA TGGCAGCGCT TACCGGAACC 
CCCGAGCTTG AACAAATCAG GCAGGAATAC GATGCCATCT TCACGGATAA ATGCCGCGAT 
CTCTTTGCCC CATTCTGTGC GGGTAAACCG CTTCATGATG CCGCATTACG CGCGATGCTT 
GGTTCCGCCG AAGGATTATC TTATGCCGCG GTGAAAGGGA TTATTACGGA ACAACAGGCT 
AAAGATGAAC TATTCCACGT GATTATTTCT ATGGTGCAAC GGTGTAGCGC GGGACAATAA
 
Protein sequence
MPTSQTRQRL SREARHVQLI KAAWQIIREE GTEALTLGHL AEQAGVTKPV VYDHFTNRSG 
LLAALYKEYD ARQTAIMDDI IRKTEPMLDK LAAVIATSYI DCVLLQGREM PNVMAALTGT 
PELEQIRQEY DAIFTDKCRD LFAPFCAGKP LHDAALRAML GSAEGLSYAA VKGIITEQQA 
KDELFHVIIS MVQRCSAGQ