Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0815 |
Symbol | |
ID | 8131740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 952943 |
End bp | 954259 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864099 |
Product | permease for cytosine/purines uracil thiamine allantoin |
Protein accession | YP_003016405 |
Protein GI | 253687215 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1457] Purine-cytosine permease and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA TAGATGATTA CCCTGTCAGC CGTGTTCCGC TGAGTGTCCG GCTGCCTTTT TTAAATGTGG CATTAGTCCA CATCGGCATG TTAACTGCCC TGGATCAGTT TATGTTAGGT GCAGTACTCG GCCATTCCAT GACGCTAAGC CAGGCATTTC TCGCCATCTT TATTGGTAGC GCCATTTTTG GTGTGGTGAC CGTGGGTCTG GGCTACGCGG GAATGAAAGA AGGTATGTCC GGCAGCCTGC TCGCACGCTG GTGCGGATTT GGTCGTATAG GTTCCGTCCT GATTGGGCTG GTCATCGCCG TTAGCCTCAT CGGTTGGTTC GGCGTCCAGA ATGCCGTATT CGCCAAAGCG CTCAATTTCG CAATGGCAGA TAAGCTCGGC TTTGGCTGGT CCGCCGCCCT GTCCGGCATT GCGCTGACGC TGCTGGTTGC CTTTGGTTTC AGGGCATTAC GCTTCACAGC CAAAATTGCC GTACCGATGT TTGTTATTGT CGTCGGCTAT ATCTCGATCA TGACGCTCTC CGGTCACAAT ATTGCTGAAC TGATCGCCTC GGCACCTAAC GGCGCGGCGA TTTCGATTAG CGCAGGGGCG ACGATGGTCG TAGGCGGCTG CATCGTCGCC AGCTTAATTA CGCCTGATAT GACGCGCTAT TCCCAAACAG GAAAACACGT TTTCTGGATG ACGATACTGT CGATTATCGT CGGGGAATTT ATTGTGAATG GCCTTGCCAT CATTATCGCC CGCGCGCTCA ATACCGCAGA CGTTGTGACG ATCATGTCCC AGGCGGCTGG CGGCATCGGG CTGATTGCCG TCATATTTTC GACATTGAGA GTGAACGATA TCAACCTGTA TTCTTCCTCT TTAGGAATCG CCAATGCCAT AGAAGGCGTC ACGGGGAGAA AATTACGCTA TGTCTCGATC ACGCTAGTGA TTGGCCTCAT TGGCACCCTG CTTTCCGTCG CGGGTATTCT GGATCGCTTT ATCGATTTCC TGACGCTATT AGGCGTGCTG TTCCCTCCAA TTATCGGCGT GATGCTGGTT GATTATTATA TTTTACGAAC CCACAGGGCG CTGCTCGATG CCAGTCGTGC CGAAGGTCAA TTACCTGACA GCGCACAAAC ACCGCTGATT GGCTGGCCTG CTATTATTGC CAGCATTGTC GGTGCTATCG TTGGATTAGC CTTTGAGTGG GGCGTACCGG CGTTTAATTC GATACTGGCA GCCAGCCTGA TTTATTGGAT AATAAAGCAT TACACCAATA ACTATGTGTA TTTTAGGAAA CCAGAGCATA ACCAAAATTT AAAATGA
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Protein sequence | MEKIDDYPVS RVPLSVRLPF LNVALVHIGM LTALDQFMLG AVLGHSMTLS QAFLAIFIGS AIFGVVTVGL GYAGMKEGMS GSLLARWCGF GRIGSVLIGL VIAVSLIGWF GVQNAVFAKA LNFAMADKLG FGWSAALSGI ALTLLVAFGF RALRFTAKIA VPMFVIVVGY ISIMTLSGHN IAELIASAPN GAAISISAGA TMVVGGCIVA SLITPDMTRY SQTGKHVFWM TILSIIVGEF IVNGLAIIIA RALNTADVVT IMSQAAGGIG LIAVIFSTLR VNDINLYSSS LGIANAIEGV TGRKLRYVSI TLVIGLIGTL LSVAGILDRF IDFLTLLGVL FPPIIGVMLV DYYILRTHRA LLDASRAEGQ LPDSAQTPLI GWPAIIASIV GAIVGLAFEW GVPAFNSILA ASLIYWIIKH YTNNYVYFRK PEHNQNLK
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