Gene PC1_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0806 
Symbol 
ID8131731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp940928 
End bp941614 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content53% 
IMG OID644864090 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003016396 
Protein GI253687206 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.459024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCT CTTTTCAGAT CAACAACAAC GAACCAGTCA ACCAGCAAAT TTATCGCGTA 
CTGCGCAAAG ACATTGTGGA ATGCAATATT CCGCCGGGTA AGCTGCTGTC TGAAAAAGAA 
ATTTCTGTGC GTTTTGATGT GTCTCGCCAG CCGGTTCGAG AGGCTTTTAT CAAGCTGGCA 
GAGGCCGGTC TGGTGCAGAT CCTGCCGCAG CGCGGCACGT TTGTCATGAA GATCTCCGAG 
CAACGCGTGG CGGATGCCCG CTTTATCCGT CAGGCGCTGG AATGCGCGAT TGTACGTCGG 
GCGGCAGAAA TGGTGACGGA TGAACAACTG CTGACGCTGG AGCACAATTT ACGCCGTCAG 
GAACTGGCTG CGCAGAATGA ACAAGTGCGC GAGTTCCTTA GCCTCGATGA CAGCTTCCAT 
CAGCTTCTGA CGCAGATTGC CAACTGTCCG CTGGCGTGGG AAACCATCGA ATCGATCAAA 
GCGACAATGG ACCGCGTACG TTTTCTCAGC CTGAGCCAGG TTTCTCCGCC AGTCAGTCTG 
ATCCAACAGC ACTATCTGAT TTTTAGCGCC CTGAAAGCGC GGGATCCCGA TGCGGCGGAA 
AAAGCGATTC GTGAACATTT GCAGGAAATG ATCTATTCAA TCACGCCGAT TGCGCAACAG 
AATAGCGATT GGTTCGAGCA CGCCTGA
 
Protein sequence
MDTSFQINNN EPVNQQIYRV LRKDIVECNI PPGKLLSEKE ISVRFDVSRQ PVREAFIKLA 
EAGLVQILPQ RGTFVMKISE QRVADARFIR QALECAIVRR AAEMVTDEQL LTLEHNLRRQ 
ELAAQNEQVR EFLSLDDSFH QLLTQIANCP LAWETIESIK ATMDRVRFLS LSQVSPPVSL 
IQQHYLIFSA LKARDPDAAE KAIREHLQEM IYSITPIAQQ NSDWFEHA