Gene PC1_0769 details

Gene Information

• Locus tag: PC1_0769
• ID: 8131694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 899509
• End bp: 901461
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644864053
• Product: ABC transporter related
• Protein accession: YP_003016359
• Protein GI: 253687169
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.419692
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACAT CCTTACTTAA GCTGACTGGC ATTACCCGCC GCTTTTCCAA CGGCGAACAG 
GACGTTACCG TCCTCAAGGA CATCAACCTG ACGATCAATC AGGGAGAAAT GGTGGCGATT 
GTCGGCGCAT CCGGGTCGGG AAAATCCACG CTGATGAATA TTCTCGGCTG TCTGGATAAA 
CCGTCCTCCG GTGATTACCA GGTGGCAGGA CGTGCTGTTG GCGAGCTGGA CAACGACCAG 
TTGGCGGAAC TGCGTCGCGA GCATTTCGGT TTTATTTTCC AGCGTTATCA CCTGCTGGGC 
GACCTCAGCG CGCTGGGGAA TGTCGAAGTA CCGGCCATTT ATGCCGGTAA GAGCCGGCTG 
GCACGCCGTC AGCGGGCAGC AGAGCTGTTA ACCCGTCTGG GACTGGAAAA TCGCCTCCAC 
TATCGTCCCA GCCAGCTTTC CGGCGGCCAG CAACAGCGCG TGAGTATCGC CCGTGCGCTG 
ATGAACGGCG GTGGCATTAT TCTGGCGGAT GAACCAACCG GTGCGTTGGA CACCCACAGC 
GGCAACGAAG TCCTGAGCAT ACTCCGCGAT CTGCACAAAC AGGGCAATAC AGTCGTGATC 
GTCACCCACG ATATGACGAT TGCCGAACAC GCTCAACGCA TCATCGAATT GCGCGATGGC 
GAAGTGATTG CCGATCGACA AACGCGTCCC GAAGAGGCCA CAGCACCGTT GCCTGAAGCC 
TCAAGCTCTC CGGCAACTTC CGCACTTAAT CAGTTCAAAG ACCGCTTTAT TGACGCGTTT 
AAAATGGCGC TGTTGGCGAT GAATGCCCAG CGGATGCGCA CCTTTTTGAC CATGCTCGGC 
ATTATCATCG GCATCGCCTC CGTCGTCTCG GTGGTCGCAC TGGGAAAAGG CTCACAGGAG 
CAAGTGCTGG CCGATATCAA CTCGATGGGC ACCAGCACGT TGGAAATTTT CCCCGGCAAA 
GATTTCGGCG ACATGGATGC CAGCGCCATT CAGACGTTGC GAGCCAGCGA TATTCAGCCG 
CTGACGCAGC AGCCCTACGT GCATAGCGTC ACACCTTCTA TTTCCACCAG CGTAACGATG 
CGCTATGGCA ACATTGCCGT TTCCGCCAGC GTTTCCGGGG TTGGCGAGCA GTTCTTTACC 
GTACGTGGCT ACACCCTGCA ACGCGGTGTG CTTTTCCCTC GCAGCAGCGT CGATGAACTG 
GCACAGGACG CGGTGATTGA CAAAAATACG CTTAACAAGC TCTTTCCCCA CGGTGAGGAC 
CCGATTGGGC AAGTCATTCT ATTGGGCTCG CTGCCCGTAC GGATTATTGG CGTCGTCAGC 
AAGAATCAGG GCGGCTTCGG CAGCGATGAG AATCTGAATG TCTGGGTGCC GTACACCACG 
GTGATGAAGC GTATGGTTGG GCAGTCCTAT CTGAAAAGTA TCACGGTGCG GGTAAAAGAC 
AATATTGATA TGAACGTCGC CGAGAAAAGC ATCACTGCAC TGCTGACGCA ACGGCACGGT 
ACGAAAGATT TCTTTATCAT GAACACGGAC AGCATTCGTC AGATGATCGA GAAAACCACC 
ACCACGCTCA CGCTGCTGGT GTCGATGATC GCCCTGATTT CGCTGCTGGT CGGCGGTATT 
GGCGTAATGA ATATCATGCT GGTGTCCGTC ACCGAGCGAA CCCGAGAGAT CGGCGTCCGT 
ATGGCGGTCG GCGCGCGCAC CAGCGATATC ATGCAACAGT TTCTGATCGA AGCTGTGCTG 
GTCTGCCTGT TCGGCGGCAT CATCGGCGTG GGGCTATCGC TGGCTATCGG CGTACTGTTC 
GCACAGTTCA GCAGCAATTT CGCGATGATC TATTCCAGTT CCTCGATTAT TGCAGCATTC 
CTGTGTTCCA GTCTGATCGG CATTATCTTC GGCTTCTTCC CCGCCCGTCG TGCAGCGCGG 
ATGGAACCGA TTCACGCGCT GGAGCGGGAA TAG 

 

Protein sequence

MSTSLLKLTG ITRRFSNGEQ DVTVLKDINL TINQGEMVAI VGASGSGKST LMNILGCLDK 
PSSGDYQVAG RAVGELDNDQ LAELRREHFG FIFQRYHLLG DLSALGNVEV PAIYAGKSRL 
ARRQRAAELL TRLGLENRLH YRPSQLSGGQ QQRVSIARAL MNGGGIILAD EPTGALDTHS 
GNEVLSILRD LHKQGNTVVI VTHDMTIAEH AQRIIELRDG EVIADRQTRP EEATAPLPEA 
SSSPATSALN QFKDRFIDAF KMALLAMNAQ RMRTFLTMLG IIIGIASVVS VVALGKGSQE 
QVLADINSMG TSTLEIFPGK DFGDMDASAI QTLRASDIQP LTQQPYVHSV TPSISTSVTM 
RYGNIAVSAS VSGVGEQFFT VRGYTLQRGV LFPRSSVDEL AQDAVIDKNT LNKLFPHGED 
PIGQVILLGS LPVRIIGVVS KNQGGFGSDE NLNVWVPYTT VMKRMVGQSY LKSITVRVKD 
NIDMNVAEKS ITALLTQRHG TKDFFIMNTD SIRQMIEKTT TTLTLLVSMI ALISLLVGGI 
GVMNIMLVSV TERTREIGVR MAVGARTSDI MQQFLIEAVL VCLFGGIIGV GLSLAIGVLF 
AQFSSNFAMI YSSSSIIAAF LCSSLIGIIF GFFPARRAAR MEPIHALERE