Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0696 |
Symbol | |
ID | 8131620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 819168 |
End bp | 819965 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644863981 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_003016287 |
Protein GI | 253687097 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCG CACTGGGGCA ATTCGCCGTT GACCGCGAGT GGCAACAAAA CGCCACAACC ATCGCTGAGT TCATGTCAGC AGCACAGCAA AACGGGGCTG ACCTGCTGGT GCTGCCCGAA GGCGTGCTGG CGCGTGATAT CACCAATCCC AATATGGTGC TCACCGCTGC TCAGCCGCTT GATGGCCCGT TTATTTCGCA TCTGCTGGAA GCCAGTAAAG GCAACAACCT GACGACCATG CTGTGCGTGC ATATCCCGAA TGGCGAAGGA AAAGTCTGGA ATACGCTGCT GGCGTTGCGT AACGGTGAGA TCGTTGCTCA ATACCGAAAG CTGCACCTGT ACGATGCGTT TTCCGTACAG GAATCGGAAA ACGTACTGGC AGGCGAAGAG ATTCCACCGC TGTTGACCAT CGCTGGGTTA AACGTCGGGC TGATGACCTG CTATGACATT CGCTTCCCTG AACTTGCTCG CCGTCTGGTG CTGGACGGCG CAGATGTACT CGTTCTCCCC TCCGCCTGGA TTAAGGGGCC GCTGAAAGAG GCGCACTGGG AACTATTGGT GCGAGCCAGA GCACTGGAAA ACACCACTTA TCTCGTCGCC GTTGGCGAAT GCGGCGTCAA GAATATCGGC AACAGTATGG TGGTCGATCC TTTAGGCGTT GTTGTGGTTC AGGCACCGGA AACACCGGCT CTCATTTATG CCGACATTGA ACCGGAACGA CTGGCCTATG CCCGTCAGAT TCTTCCAGTA CTCGCGAATC GACGCTTTCA AAAACCCACG TTAGACGGGG AAAATTGA
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Protein sequence | MKVALGQFAV DREWQQNATT IAEFMSAAQQ NGADLLVLPE GVLARDITNP NMVLTAAQPL DGPFISHLLE ASKGNNLTTM LCVHIPNGEG KVWNTLLALR NGEIVAQYRK LHLYDAFSVQ ESENVLAGEE IPPLLTIAGL NVGLMTCYDI RFPELARRLV LDGADVLVLP SAWIKGPLKE AHWELLVRAR ALENTTYLVA VGECGVKNIG NSMVVDPLGV VVVQAPETPA LIYADIEPER LAYARQILPV LANRRFQKPT LDGEN
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