| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0662 |
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| Symbol | |
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| ID | 8131586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 767770 |
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| End bp | 768480 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644863947 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003016253 |
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| Protein GI | 253687063 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00302199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTGTAT TAGTGGTTGA TGATGATTCT GTGCTGTGCC ATTGGCTGGG GTCTAAATTA
CATTCCCACG GCCATTCTTG CCGAATGGTG CACGATGGCG CACACGCATT AAAAGCGATC
AAGGATGAAG TTTATGATGT CGTTCTGTTA GACAGAATGT TACCCATCAT GGACGGATTT
ACGGTATTAC GTGAATTACA AGGCTCGCGT CATCCCCCTA TTATGCTGCT TTCCGCACTG
GATCGTGATG TCGATCGGGT GATGGGCTTA GAGCTTGGCG CAGAAGATTA TCTCGGCAAG
CCTTTTAATT TTAATGAGCT TAGATTACGT CTGGATATTA TGGCGCGGCG CGGTAAACGC
CACGTGGATA ATCCTTCTAT GCTGACTTTT GAAGACCTGC AGCTTGACCG TATGCAGCGT
GTTGCATGGC GCGGTGGCAA GCGTATCGAT TTGACCGATA AAGAAATCAA GTTACTGATT
ATATTGATGG AAAATCCGGG GCAGGCCATT ACGCGCACCA TGCTGTTAGA GCGCGTATGG
GGTTACAATT TTGATCCGCA AACCAATCTG ATCGACGTTC ATATGTCAAA GCTGCGGGCG
AAAATTGATA AAGGCTTCCC GCGTCCATTA ATTAAAACGT TGAGGGCGAT GGGCTACGCA
TTAGGCGCGG TAGATAAGGA CAAAACTGAT GTTGGCAGCC ACGCTGAATA A
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| Protein sequence | MRVLVVDDDS VLCHWLGSKL HSHGHSCRMV HDGAHALKAI KDEVYDVVLL DRMLPIMDGF
TVLRELQGSR HPPIMLLSAL DRDVDRVMGL ELGAEDYLGK PFNFNELRLR LDIMARRGKR
HVDNPSMLTF EDLQLDRMQR VAWRGGKRID LTDKEIKLLI ILMENPGQAI TRTMLLERVW
GYNFDPQTNL IDVHMSKLRA KIDKGFPRPL IKTLRAMGYA LGAVDKDKTD VGSHAE
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