| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0636 |
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| Symbol | |
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| ID | 8131559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 740446 |
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| End bp | 741093 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863920 |
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| Product | channel protein, hemolysin III family |
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| Protein accession | YP_003016227 |
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| Protein GI | 253687037 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAAA ATGCACAGAT GCCGGATTAC TCTCTGGCAG AGGAAATTGC GAATAGCATA
AGCCATGGAA TCGGTGTGAT TTTCGGGATT GTGGGTCTGG TTTTATTGCT GGTTCAGGCG
GTCAACAATG ACGCCGGCAG CGTGGCGATT ACCAGCTACA GCCTCTATGG CGGCAGTATT
ATCCTGCTAT TTTTGGCGTC GACGCTGTAT CACGCGATAC CGTCTCAGCG TATTAAGCCG
TGGCTGAAAA AATTCGACCA CTGCGCCATC TATCTGTTGA TTGCCGGAAC CTATACGCCA
TTTTTGCTGG TGGGGCTGGA TTCACCGCTG GCGCATGGTC TGATGGTTGT TATCTGGGGG
ATGGCGCTGC TGGGTGTGAT CTTCAAACTG GCGTTTGCCC ACCGTTTTGA AGTGCTGTCA
TTGATTACCT ATCTGGTGAT GGGCTGGCTG TCGCTGGTGG TGATTTATCA GATGGTGATG
AAACTGGCGC CAGGGAGCGT GACGCTGCTG GCAGTCGGCG GCGTGGTGTA CACGCTGGGG
GTGATTTTCT ACGCCTGCAA GCGTATTCCC TATAATCACG CGATTTGGCA CGGGTTTGTA
TTGGGTGGGA GCGTCTGCCA CTTTCTGGCG ATTTATCTTT ATATTTAA
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| Protein sequence | MSKNAQMPDY SLAEEIANSI SHGIGVIFGI VGLVLLLVQA VNNDAGSVAI TSYSLYGGSI
ILLFLASTLY HAIPSQRIKP WLKKFDHCAI YLLIAGTYTP FLLVGLDSPL AHGLMVVIWG
MALLGVIFKL AFAHRFEVLS LITYLVMGWL SLVVIYQMVM KLAPGSVTLL AVGGVVYTLG
VIFYACKRIP YNHAIWHGFV LGGSVCHFLA IYLYI
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