Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0632 |
Symbol | lacY |
ID | 8131555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 734661 |
End bp | 735923 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644863916 |
Product | galactoside permease |
Protein accession | YP_003016223 |
Protein GI | 253687033 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACCA CCTCGTGCTA CTACAAAAAC AACCGTAACT TCTGGATTTT CGGCGCGTTC TTCTTTCTTT ATTTTTTTAT CATGGCGACG TGCTTTCCGT TTTTACCGAT CTGGCTGGCG GACGTTATCG GGCTTAACAA AACCAATACC GGTATCGTCT TTTCCTTCCT GTCCTTGTTC GCGATTCTGT TTCAGCCGTT CCTCGGCATC CTGTCCGACA AACTGGGGAT GAAGAAACAC CTGCTATGGG TGATCTCTGT CCTGTTGCTC TTTTTTGCCC CTTTCTTCCT GTATGTCTTC GCCCCACTGT TAAAAATCAA CGTGATACTG GGCGCTCTGG TCGGCGGTCT GTATATCGGG TTCTCTTTTA GTGCGGGAGC GGGAGCGATT GAAGCCTACA TCGAGCGCAT CAGCCGACAG CACCACTTTG AGTATGGCAA AGCGCGCATG TTTGGCTGCT TTGGCTGGGG AATTTGCGCT TCAACGGCAG GTATGCTGTT TAATATCAAT CCCGATATCG TGTTCTGGAT GGGATCTGGG TCGGCGATTA TCTTGATCGT GCTGCTGTGT CTGGCAAAGA CGGAAAGCAA TCCAACTGCT GCCGTCATGG ACTCGCTCGG CGCCAACGCC TCGCCTTTTA GTGTAAAACT GGCATTAGGC TTGCTGGCCA ACCGTCAGTT CTGGCTGCTG GTGTTATACG TGATTGGCGT CGCCTGTATT TATGACGTCT ACGATCAGCA ATTCGCTAAT TTCTTTAAAT CGTTCTTTAG TTCGCAGGAA CAAGGCAACC AGATCTTTGG TTTTGTCACC ACCGCCGGGG AAGCGGCAAA TGCGCTGGTC ATGTTCTGCA CGCCGTGGCT CATTAACCGG ATCGGCGCTA AAAATGCATT GCTGGTGGCA GGAACGATTA TGTCGATCAG GATTTTGGGC TCGGCCTGTG CCACATCCGT CACGGAAGTC ATCATACTGA AAATGCTGCA CGCCTTCGAA GTGCCGCTGC TGCTCATCGG TATTTTCAAA TACATCGCCA ACACGTTTGA TTCTCGCTTG TCGGCGACCA TTTATCTGGT GGGCTTCCAG TTCGCTAAGC AGTTTATGGC GATATTCCTC TCCTCTGCGG CGGGCAATCT GTACGATCGC ATCGGCTTCA ACCAGACTTA CCTTATTCTG GGTGGTATCG CGCTCACCTT TACCGCGATC TCCGCCTTTA CGCTGTCATC TTCACGTAGT ACGGCGAGTA TGCGTTCTCA GGCTGTGCAT TAA
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Protein sequence | MPTTSCYYKN NRNFWIFGAF FFLYFFIMAT CFPFLPIWLA DVIGLNKTNT GIVFSFLSLF AILFQPFLGI LSDKLGMKKH LLWVISVLLL FFAPFFLYVF APLLKINVIL GALVGGLYIG FSFSAGAGAI EAYIERISRQ HHFEYGKARM FGCFGWGICA STAGMLFNIN PDIVFWMGSG SAIILIVLLC LAKTESNPTA AVMDSLGANA SPFSVKLALG LLANRQFWLL VLYVIGVACI YDVYDQQFAN FFKSFFSSQE QGNQIFGFVT TAGEAANALV MFCTPWLINR IGAKNALLVA GTIMSIRILG SACATSVTEV IILKMLHAFE VPLLLIGIFK YIANTFDSRL SATIYLVGFQ FAKQFMAIFL SSAAGNLYDR IGFNQTYLIL GGIALTFTAI SAFTLSSSRS TASMRSQAVH
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