| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0549 |
|---|
| Symbol | dnaG |
|---|
| ID | 8131467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 638359 |
|---|
| End bp | 640113 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644863828 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_003016140 |
|---|
| Protein GI | 253686950 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00237945 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAC GAATCCCACG CGTATTTATT AATGACCTGC TGGCTCGTAC CGACATCGTC
GATCTCATTG ACGCGCGTGT CAAACTGAAA AAGCAAGGCA AAAACTACCA TGCGTGCTGT
CCGTTCCATC ACGAAAAAAC CCCCTCATTC ACCGTAAACG GTGACAAGCA GTTCTACCAC
TGTTTTGGTT GTGGCGCCCA CGGCAACGCC ATTGACTTTT TGATGAATTA CGATCGTCTC
GAATTCGTTG AAACTATTGA AGAACTGGCC ACCCAATACG GCCTCGAAGT GCCTTATGAA
AGCGGCACTG GCCCAACCCA GTTAGAGCGT CACCAGCGGC AAAGTCTGTA CGAATTGATG
GGACAGCTTA GCGGGTTCTA TCAACAAGCA CTTAGCCAAT CAGTCGGTAC GCCAGCGTTG
CAGTACCTGC AACAACGCGG TTTAAGCGCA GAGGTTATCA GCCATTTTGC GATTGGCTTC
GCCCCGCCCG GCTGGGATAA CGTTTTAAAG CGCTTTGGCC GCAATAATGA CGATCGCAGC
ACATTGAACG ATGCCGGCAT GCTGGTGACT AACGATCAGG GCCGAACGTA TGACCGCTTC
CGCGAACGTG TGATGTTCCC CATCCGCGAC AAACGGGGGC GAGTGATTGC CTTCGGCGGA
CGAGTATTAG GCGATGGTAC GCCAAAGTAC CTGAACTCGC CGGAAACAGA GATTTTTCAT
AAAGGTCGCC AGCTGTACGG CCTGTATGAA GCGCAGCAAA GCCACGCGGA GCTAAAACGA
CTTTTGGTTG TTGAAGGCTA CATGGATGTG GTGGCATTGG CGCAGTTTGG TATTGATTAT
GCCGTAGCGT CGCTGGGCAC GTCCACGACT GCCGATCACA TTCAGTTACT ATTTCGCGCC
ACCGATCTGG TGGTGTGTTG TTACGACGGG GACCGTGCAG GACGCGAAGC GGCATGGCGC
GCGCTGGAAA CTGCGCTACC CTATTTGAAC GATGGTCGTC AGCTACGCTT TATGTTCCTG
CCGGACGGTG AAGATCCCGA CACGCTGGTA CGTAAAGAAG GCAAAGCCGT CTTTGAACAG
CGCATGGAAC AAGCCTTGCC GCTGTCGCAG TTTCTGTTTG AGACGTTGCA GCAGCAGGTG
GATATGAGTT CCCCCGATGG CCGTACCAAG CTCAGCACGC TGGCGCTGCC GCTGATAGGT
CAGGTACCGG GAGAAACGCT GCGGCTGTAT TTGCGCCAGC AGCTCGGCAA TAAGCTGGGT
ATTTTGGACG ACAGCCAATT GGACAGGCTA CTGCCTAAAG TGGCAGAGCA GGCGCAGCCT
TATCAGCCGC CGCAACTAAA AGTCACAACT ATGCGTATAC TTATAGGACT TTTAGTACAA
AACCCAAGGC TGGCGGCAGA GGTTCCTGAC CTCGCGCTGG AAGGGATTGA AGAAGACAAA
GTGGCTGGTT TATCGCTGTT TCAGGATTTG GTGAAAACCT GTAACGCCAG CCCTGGAATG
AACATGGGTC TGCTGTTGGA AAAATATCGC GACAGCAAGT ACCGCAAACA GCTTGAAACC
ATGGCTTCAT GGAACCATAT GATCGTAGAG GAAGAGCTCG ACGAGAAGTT CAGAATCAGT
CTGGCAGAGC TCTACGATCA GCTGTTGAAA CAGCGACAAG AAACATTGAT TGCCCGTGAC
CGAACGCACG GGCTCAGCGC CAAAGAAAAA AAAGAGCTTT GGTCGTTGCA ACTGGCGTTG
ACCAGAAAAC ACTGA
|
|---|
| Protein sequence | MAGRIPRVFI NDLLARTDIV DLIDARVKLK KQGKNYHACC PFHHEKTPSF TVNGDKQFYH
CFGCGAHGNA IDFLMNYDRL EFVETIEELA TQYGLEVPYE SGTGPTQLER HQRQSLYELM
GQLSGFYQQA LSQSVGTPAL QYLQQRGLSA EVISHFAIGF APPGWDNVLK RFGRNNDDRS
TLNDAGMLVT NDQGRTYDRF RERVMFPIRD KRGRVIAFGG RVLGDGTPKY LNSPETEIFH
KGRQLYGLYE AQQSHAELKR LLVVEGYMDV VALAQFGIDY AVASLGTSTT ADHIQLLFRA
TDLVVCCYDG DRAGREAAWR ALETALPYLN DGRQLRFMFL PDGEDPDTLV RKEGKAVFEQ
RMEQALPLSQ FLFETLQQQV DMSSPDGRTK LSTLALPLIG QVPGETLRLY LRQQLGNKLG
ILDDSQLDRL LPKVAEQAQP YQPPQLKVTT MRILIGLLVQ NPRLAAEVPD LALEGIEEDK
VAGLSLFQDL VKTCNASPGM NMGLLLEKYR DSKYRKQLET MASWNHMIVE EELDEKFRIS
LAELYDQLLK QRQETLIARD RTHGLSAKEK KELWSLQLAL TRKH
|
|---|
| |