Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0527 |
Symbol | |
ID | 8131444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 607698 |
End bp | 608474 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644863805 |
Product | DNA-binding transcriptional repressor ExuR |
Protein accession | YP_003016118 |
Protein GI | 253686928 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTCA CTGAACCCCG ACGGCTATAC CAGCAGTTAG CCGCAGAATT AAAACAGCGT ATCGAAAGCG GTATGTATCA GGTCGGCGAA AAATTACCGG CAGAACGCTA TATTTCTGAA GAAATGAACG TCAGCCGCAC CGTAGTGCGT GAAGCTATTA TTATGCTGGA AGTCGAAGGG TACGTTGAAG TACGCAAGGG TTCAGGCATT CACGTCATTT CCAACCAGCA GAAGAACCCG TTCATTAATA GCGGCGATAT TGAATTCGTC GCGGCAGGTC CGTTCGAGCT GCTTCAGGCA CGCCAACTCA TTGAAAGCAA CATTGCTGAA TTTGCCGCTA CGCAGGTAAC CCGTCAGGAC ATCATCCAAC TGATGGAAAT TCAGGAGTAT GCACGTCAGG AAGATCGCTT CCGTGACTCT CAGTGGGATC TGAAATTCCA CGTTCAGGTC GCGCTGGCAA CACAAAATTC CGCGATGGCG ACCATCGTCG AAAAAATGTG GAGCCAACGG ATCCACAATC CCTACTGGCG CAAACTGCAT GAGCACATTG ACGACAAGTC GATAGAAAGC TGGTGCGAAG AGCACGACCG CATCCTTAAG GCGCTGATTC GCAAAGATCC TTACGCCGCC AAGCTGGCGA TGTGGCAACA TCTGGAAAAC ACCAAGCAGA TGCTGTTTCG CGCCACGACA GACGATTTCG AGTTTAACGT CGATCGCTAT ATGTTCGCCG AAAACCCGGT CGTGCACCTC GACCAGATAC ACGCGGGTAA ATCCTAA
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Protein sequence | MALTEPRRLY QQLAAELKQR IESGMYQVGE KLPAERYISE EMNVSRTVVR EAIIMLEVEG YVEVRKGSGI HVISNQQKNP FINSGDIEFV AAGPFELLQA RQLIESNIAE FAATQVTRQD IIQLMEIQEY ARQEDRFRDS QWDLKFHVQV ALATQNSAMA TIVEKMWSQR IHNPYWRKLH EHIDDKSIES WCEEHDRILK ALIRKDPYAA KLAMWQHLEN TKQMLFRATT DDFEFNVDRY MFAENPVVHL DQIHAGKS
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