Gene PC1_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0527 
Symbol 
ID8131444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp607698 
End bp608474 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID644863805 
ProductDNA-binding transcriptional repressor ExuR 
Protein accessionYP_003016118 
Protein GI253686928 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCA CTGAACCCCG ACGGCTATAC CAGCAGTTAG CCGCAGAATT AAAACAGCGT 
ATCGAAAGCG GTATGTATCA GGTCGGCGAA AAATTACCGG CAGAACGCTA TATTTCTGAA
GAAATGAACG TCAGCCGCAC CGTAGTGCGT GAAGCTATTA TTATGCTGGA AGTCGAAGGG
TACGTTGAAG TACGCAAGGG TTCAGGCATT CACGTCATTT CCAACCAGCA GAAGAACCCG
TTCATTAATA GCGGCGATAT TGAATTCGTC GCGGCAGGTC CGTTCGAGCT GCTTCAGGCA
CGCCAACTCA TTGAAAGCAA CATTGCTGAA TTTGCCGCTA CGCAGGTAAC CCGTCAGGAC
ATCATCCAAC TGATGGAAAT TCAGGAGTAT GCACGTCAGG AAGATCGCTT CCGTGACTCT
CAGTGGGATC TGAAATTCCA CGTTCAGGTC GCGCTGGCAA CACAAAATTC CGCGATGGCG
ACCATCGTCG AAAAAATGTG GAGCCAACGG ATCCACAATC CCTACTGGCG CAAACTGCAT
GAGCACATTG ACGACAAGTC GATAGAAAGC TGGTGCGAAG AGCACGACCG CATCCTTAAG
GCGCTGATTC GCAAAGATCC TTACGCCGCC AAGCTGGCGA TGTGGCAACA TCTGGAAAAC
ACCAAGCAGA TGCTGTTTCG CGCCACGACA GACGATTTCG AGTTTAACGT CGATCGCTAT
ATGTTCGCCG AAAACCCGGT CGTGCACCTC GACCAGATAC ACGCGGGTAA ATCCTAA
 
Protein sequence
MALTEPRRLY QQLAAELKQR IESGMYQVGE KLPAERYISE EMNVSRTVVR EAIIMLEVEG 
YVEVRKGSGI HVISNQQKNP FINSGDIEFV AAGPFELLQA RQLIESNIAE FAATQVTRQD
IIQLMEIQEY ARQEDRFRDS QWDLKFHVQV ALATQNSAMA TIVEKMWSQR IHNPYWRKLH
EHIDDKSIES WCEEHDRILK ALIRKDPYAA KLAMWQHLEN TKQMLFRATT DDFEFNVDRY
MFAENPVVHL DQIHAGKS