Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0507 |
Symbol | |
ID | 8131424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 591303 |
End bp | 591776 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863785 |
Product | FxsA cytoplasmic membrane protein |
Protein accession | YP_003016098 |
Protein GI | 253686908 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.198266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCTGGT TACCGTTATT ACTGATTTTT CTTTTAGCTT ACATCGAGAT ATCGCTGTTT ATTCAGGTGG CTGAAGTGTT GGGCGTCGCC ATGACCCTGC TGCTGGTGGT CTTCACGTCT TGCGTGGGCG TGTCGCTGGT GCGCAATCAG GGGATGAAAA CGCTGGTGCA GATGCAGCAG AAAATGGCGG CGGGTGAAAG CCCGGCTGCT GAAATGGTTA AAAGTGTGTC GCTGGTGCTG GCTGGTTTCT TACTCCTGAT TCCGGGTTTC CTGACCGACT TTTTGGGCCT GTTGCTGCTG CTGCCACCAG TACAGAAAAG CCTGACCCTC AAACTGATGC CTCATCTGCA TATCTGGCGT TCTGGCTCCG GCGCGTCGTC GTCTTCTGGT GGTAACACCT TTGAAGGTGA ATACCAGCGC AAGGATGGCG GGAGCGCAAA TATTGAACAT CGCGACGATC GTGACGACCG TTAA
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Protein sequence | MRWLPLLLIF LLAYIEISLF IQVAEVLGVA MTLLLVVFTS CVGVSLVRNQ GMKTLVQMQQ KMAAGESPAA EMVKSVSLVL AGFLLLIPGF LTDFLGLLLL LPPVQKSLTL KLMPHLHIWR SGSGASSSSG GNTFEGEYQR KDGGSANIEH RDDRDDR
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