Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0398 |
Symbol | |
ID | 8131313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 454792 |
End bp | 456231 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644863677 |
Product | aspartate ammonia-lyase |
Protein accession | YP_003015991 |
Protein GI | 253686801 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACGA ATATCCGTAT TGAAGAAGAC CTGTTAGGTA CCCGTGAAGT CCCTGCTGAT GCCTATTATG GTATCCATAC GCTGCGTGCA ATTGAGAACT TTTATATCAG CAATAGCACC ATCAGCGATA TTCCAGAATT TGTCCGCGCC ATGGTAATGG TAAAAAAAGC GGCCGCACTG GCGAATAAAG AACTGCAAAC CATCCCGCGT AAAATTGCCG ACACTATTCT GCAAGCCTGT GATGAAGTGT TGAATAACGG TAAATGTCTG GATCAGTTCC CTGTCGATGT CTATCAGGGC GGCGCGGGTA CGTCAGTCAA CATGAACACC AACGAAGTGC TGGCGAATAT CGGTCTGGAG CTGATGGGTC ACCAGAAAGG TGAATATCAA TACCTGAACC CGAACGACCA CCTGAACAAA TGCCAGTCCA CCAACGATGC TTACCCAACC GGCTTCCGCA TCGCGGTATA CACCTCCATC CTGAAGCTGG TTGAAGCGAT TACCCAACTG AGCGATGGCT TTGAGCGCAA AGCAAAAGAG TTCGAAAACA TCCTGAAAAT GGGCCGTACC CAGTTGCAGG ACGCCGTACC GATGACCCTT GGTCAGGAAT TCCACGCGTT CAACGTACTG CTGAAAGAAG AAAACCGTAA CCTGCTGCGC ACCGCCGAGC TGCTGCTGGA AGTGAACCTG GGCGCTACCG CCATCGGTAC GCGTCTGAAC ACGCCGGATG AGTACCAGAA ACTGGCCGTT CAACATTTGG CAAAAGTCAG CGGCCTGCCT TGCGTACCGG CTGAAGACCT GATCGAAGCA ACGTCCGACT GCGGCGCCTA CGTGATGATG CACAGCGCTC TGAAACGCGT GGCGGTAAAA CTGTCGAAGA TCTGTAACGA CTTGCGTCTG CTGTCTTCCG GCCCGCGCAC TGGCCTGAAC GAAATCAACC TGCCAGAATT GCAAGCCGGC TCGTCCATCA TGCCAGCCAA AGTTAATCCG GTTGTCCCAG AAGTCGTCAA TCAGGTGTGC TTCAAGGTCA TCGGCAACGA TACCTGCGTC ACCATGGCGG CAGAAGCGGG TCAGTTGCAG TTGAACGTGA TGGAACCGGT TATCGGACAA GCTATGTTCG AATCCATCCA GATCCTATCC AGCGCCTGCT ACAACCTGCT GGAAAAATGC GTCGACGGCA TCACCGCTAA CAAAGACGTG TGTGAAGCCT ACGTCTTCAA CTCTATCGGT ATCGTGACCT ACCTGAACCC GTTCATCGGT CACCACAACG GCGATATCGT CGGGAAAATC TGTGCCGAAA CCGGTAAGAG CGTGCGTGAA GTGGTGCTGG AGCGCGGCCT GCTGACCGAA GAACAGCTGG ACGACATTTT CTCCATCCAG AACCTGATGC ACCCGGCCTA TAAAGCCAAA CGCTACACCG ACGAAAACGA AGCCGTTTAA
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Protein sequence | MSTNIRIEED LLGTREVPAD AYYGIHTLRA IENFYISNST ISDIPEFVRA MVMVKKAAAL ANKELQTIPR KIADTILQAC DEVLNNGKCL DQFPVDVYQG GAGTSVNMNT NEVLANIGLE LMGHQKGEYQ YLNPNDHLNK CQSTNDAYPT GFRIAVYTSI LKLVEAITQL SDGFERKAKE FENILKMGRT QLQDAVPMTL GQEFHAFNVL LKEENRNLLR TAELLLEVNL GATAIGTRLN TPDEYQKLAV QHLAKVSGLP CVPAEDLIEA TSDCGAYVMM HSALKRVAVK LSKICNDLRL LSSGPRTGLN EINLPELQAG SSIMPAKVNP VVPEVVNQVC FKVIGNDTCV TMAAEAGQLQ LNVMEPVIGQ AMFESIQILS SACYNLLEKC VDGITANKDV CEAYVFNSIG IVTYLNPFIG HHNGDIVGKI CAETGKSVRE VVLERGLLTE EQLDDIFSIQ NLMHPAYKAK RYTDENEAV
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