Gene PC1_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0362 
Symbol 
ID8131276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp418734 
End bp419555 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content55% 
IMG OID644863642 
Producttransglutaminase domain protein 
Protein accessionYP_003015957 
Protein GI253686767 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA CCATCAACCA TCTCACCCAC TACCGCTACG ATGAAGAAGT GAAGTTCAGC 
ACCCAGTATT TGCGCCTGAC GCCGCAAAAC TCTGCCCATC AGAAAATACG GGAGTGGAAG
CTGACACTAC CCACCTCAGC GGTTCAAACT ACCGACGCGT ATGGTAATGT ACTGCATGTG
CTGACACTCG ACCACCCTCA TCAGGACATT ACGATTCATG CGGAAGGTGT GGTCGATATT
CTCGACAGCG GCGCAGCAGA AAATCCCGAA ATACAGGATG GGCTGTCACC GTTGGTTTTT
TTACGCCCGA CGCCGCTGAC CGAAGCCGAC GGCGAGATTC GAGCGTTTGC ACAACGCTAT
TACCGTCCAG ATGCTGCGGA GGAAAGCCTG AATACGCTGA TGGCGGAATT ACGGCTGAAA
ATGCCGTATA CTCCCGGCGC AACGCAGGTG CAGGATACCG CGGCGGCGGC ATTTGCCATG
CAGAAAGGCG TTTGTCAGGA TCACACCCAT GTGTTTCTCG CCTGCTGCCG TAGCCTGAGT
ATTCCAGCAC GCTATGTGAG CGGCTACGTG TACAGTCAGG ATACCCACCA TGTCGCCATG
CACGCCTGGG CGGAAGTGTG GTTAAACGGA TACTGGCAAG GGTTTGATAT TACCAACAGT
ACCCGACAGC TCCATCAGCA TCTGTGGCTG GCCGTAGGAA TGGATTATAT GGATGCCTGC
CCGGTTCGCG GTACGCGGCT GGGAGGGGGA TGCGAAGAGA TGTTTTCAGA AGCTGAAGTC
CGCTTGTTTG AACGGCAACA GCAGGTACAG CAGCAACAGT AG
 
Protein sequence
MKLTINHLTH YRYDEEVKFS TQYLRLTPQN SAHQKIREWK LTLPTSAVQT TDAYGNVLHV 
LTLDHPHQDI TIHAEGVVDI LDSGAAENPE IQDGLSPLVF LRPTPLTEAD GEIRAFAQRY
YRPDAAEESL NTLMAELRLK MPYTPGATQV QDTAAAAFAM QKGVCQDHTH VFLACCRSLS
IPARYVSGYV YSQDTHHVAM HAWAEVWLNG YWQGFDITNS TRQLHQHLWL AVGMDYMDAC
PVRGTRLGGG CEEMFSEAEV RLFERQQQVQ QQQ