Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0328 |
Symbol | |
ID | 8131242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 378682 |
End bp | 380232 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644863608 |
Product | transcriptional antiterminator, BglG |
Protein accession | YP_003015923 |
Protein GI | 253686733 |
COG category | [K] Transcription |
COG ID | [COG3711] Transcriptional antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.341151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAGC CACTCACCTC CCGTCAGAAC CGTTTATTGA AATATCTGTT ACAACACCAG GGATATGTAA CGGTTAAAGA TATTGCACAT TACCTCGATG TGTCTGAAAA AACTGTCTAT CGTGATATGC AATTTGTCGA AGCCTTCCTT TCTGTCTGGA ATATTTATCC AGACAAAAAG GTCGGTGCGG GAATCATGTT AACCACGGAT GACGATCGCC ATCTCACACT GTTAGAGCAG CAAATTGTCG TGGACGACGG AGAGACCGAT GCGCTGATCA ACAATGCGCG TCGCGTCAAA ATTGCCTCAC AGCTGCTGAG CGACACGCCT CATGAAACAT CCATCAGCAA GCTGTCAGAA CGCTACTTTA TCAGCAGCGC CTCTATCGTT AACGATCTGA AAATCATCGA AAGCTGGTTA CATCCACTGG GGCTGGCGCT GGTGCGCAGC CAGAGCGGCA CGCACATTGA AGGCAGTGAG AATCAGGTGC GTCATGCGAT GGCCTCGCTC ATTAATGACG TCATGCACCA TAAAGAACCT GGCCCACTTA ACCATTCTCG TCTCGACCCC GGCAGCTATA AGGCACTGAT CAACTATTTC GGTGAAGAAG ACGTGTCCTT CGTCGAATCG CTGTTACAGG ACATGGAACG ACAGCTTTCT TATCCACTCG GTGAGCCTTA TTACATCAAT ATTTTCACGC ATACCTTAAT TATGATGCAC CGCATTGCGC AGGGAAAAGC GTTAATGATG GCGGAAGAAT CCGTTCATCA GCAGGTTGAT AATCGTATAT TCTCCATCGC TCAAAACATG GTGAGCCAAA TAGAGCAGCG CGTCGAGAGC ACACTGCCTT CTGACGAAGT CTGGTTTATT TACCAATATA TTATTTCCTC CGGCATTGTG ATGGAGGAAC GGGCGGATAA CCAACTGCTC CGCTATCAAT TTTCTAACGG TGAATCACGC AGAATCACAC ACGCACTGAC GCAGATATTT TCTGATTTAA TTAATATCGA CTTACGCACA GATAAGTTAT TACATGAAGG GTTACTTATT CACATTAAGC CATTGCTTAA CCGCTTAAAG TACCAAATAC ATATTCGCAA CCCGTTATTA GACGATATCA AAAGCGAATT TATCGATATT TATGATATGA CTCAGCAAGC GATGGACGAA GTCTGTCAGC GATTTCAATT AAAACCAGTC GCTGAAGATG AAATCGGCTA TCTGACCATT CATTTTCAAG CTGCGTTAGA ACGCCAAATT GCGCATAAAC GTATTCTGGT GGTGTGTTCC AGCGGCGTAG GAACGTCACA CCTGTTGAAA AACCGCATCC TGCGCGCATT CCCTGACTGG ATTATTGTTG GCGTGGTTTC GGCCAGCAAT ATGCAGAGGT TTTGCCAGCA GGAAGAGATT GAGCTGATTA TTTCCACGAT TCATCTGGAA GAACAACACA TTCCTGTCGT CTATGTTTCC GCCTTTTTTA ATGACGATGA CATTAAACGC GTTACCGAAA AAGTTATCGC CAATCAACTG CATCAGGCCG TCCCCCACTG A
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Protein sequence | MMQPLTSRQN RLLKYLLQHQ GYVTVKDIAH YLDVSEKTVY RDMQFVEAFL SVWNIYPDKK VGAGIMLTTD DDRHLTLLEQ QIVVDDGETD ALINNARRVK IASQLLSDTP HETSISKLSE RYFISSASIV NDLKIIESWL HPLGLALVRS QSGTHIEGSE NQVRHAMASL INDVMHHKEP GPLNHSRLDP GSYKALINYF GEEDVSFVES LLQDMERQLS YPLGEPYYIN IFTHTLIMMH RIAQGKALMM AEESVHQQVD NRIFSIAQNM VSQIEQRVES TLPSDEVWFI YQYIISSGIV MEERADNQLL RYQFSNGESR RITHALTQIF SDLINIDLRT DKLLHEGLLI HIKPLLNRLK YQIHIRNPLL DDIKSEFIDI YDMTQQAMDE VCQRFQLKPV AEDEIGYLTI HFQAALERQI AHKRILVVCS SGVGTSHLLK NRILRAFPDW IIVGVVSASN MQRFCQQEEI ELIISTIHLE EQHIPVVYVS AFFNDDDIKR VTEKVIANQL HQAVPH
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