| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0284 |
|---|
| Symbol | |
|---|
| ID | 8131197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 331046 |
|---|
| End bp | 331675 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644863564 |
|---|
| Product | toluene tolerance family protein |
|---|
| Protein accession | YP_003015879 |
|---|
| Protein GI | 253686689 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAC GTTTACTGAT GGTAGCTTTA CTGGTGGTGG CACCATTAGC CAACGCGGCG
GATCAAACGA ACCCTTATCG TTTGATGAAT GAAGCAGCGG AAAAAACTTT TGACCGCTTG
AAGAGCGAGC AACCCAAGAT TAAACAAAGC CCTGACTATT TGCGTACTGT CGTGCGTGAA
GAGCTGCTGC CGTATGTTCA GGTGAGATAC GCCGGTGCGT TGGTTCTGGG GCGTTACTAT
AAAGACGCGA CACCGGCACA GCGTGATGCC TACTTCAAAG CGTTTGAAGC TTATCTGGAG
CAGGCTTACG GTCAGGCTTT GGCGATGTAC AACGGCCAAA CCTACCAAAT CGCCCCTGAA
CAGCCGCTGG GCAATGCCGA TATCATTTCT ATCCGCGTGA CCATCATTGA TAACGGCGGT
CGCCCTCCGG TGCGTCTGGA TTTCCAATGG CGTAAGAACA GCAAAACCGG TAACTGGCAG
GCGTACGACA TGATTGCCGA AGGCGTCAGT ATGATCACCA CGAAGCAAAA TGAGTGGGCG
ACCATTCTGC GTCAGAAAGG CGTTGATGGC CTGACTCAAC AGCTGGAATC CTCAGCGAAG
CAGACCATCA CGTTGGATCA GAAAAAGTAA
|
|---|
| Protein sequence | MFKRLLMVAL LVVAPLANAA DQTNPYRLMN EAAEKTFDRL KSEQPKIKQS PDYLRTVVRE
ELLPYVQVRY AGALVLGRYY KDATPAQRDA YFKAFEAYLE QAYGQALAMY NGQTYQIAPE
QPLGNADIIS IRVTIIDNGG RPPVRLDFQW RKNSKTGNWQ AYDMIAEGVS MITTKQNEWA
TILRQKGVDG LTQQLESSAK QTITLDQKK
|
|---|
| |