Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0279 |
Symbol | |
ID | 8131192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 326461 |
End bp | 327552 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863559 |
Product | D-arabinose 5-phosphate isomerase |
Protein accession | YP_003015874 |
Protein GI | 253686684 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.954706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAGT TTGAACAAGA TGCTCATCTA AAACAGCAGT CTGACCGTGC ACTATCCGAT CATGCAACAC AAGCCGATCA CGCACCACAA GCCGATCATA CGCGACAAAA GTCTCATGAA CTGCCAGCCG ATTTCGACTT CCAGCAGGCG GGTAAGCAGG TAATAAGCAT CGAACGCGAT GGGCTTGCGC AATTAGATCA GTACATTGAT GATAATTTTA CCCTCGCCTG TAAAAAGATA TTCGATTGCC AAGGCAAAGT TGTGGTGATG GGAATGGGCA AATCCGGCCA CATTGGCTGC AAGATGGCCG CGACTTTCGC CAGTACCGGT ACGCCTGCTT TTTTTGTTCA CCCAGGCGAA GCCAGCCACG GCGACCTCGG TATGGTAACG CCGCACGATA TCGTGATCGC CATTTCCAAC TCTGGCGAGT CCCATGAGAT TCTGTCGCTG ATTCCCGTCC TGAAACGTCA GAAAGTGTTC CTGATCTGCA TGACCAGCGC GCCAGAAAGT ACAATGGGTA AAGCGGCGGA TATTCACCTG TGCGTGCACG TCCCGCAGGA AGCCTGCCCG CTCGGTCTGG CTCCCACTTC CAGCACGACC GCGACGTTGG TCATGGGAGA TGCGCTGGCC GTGGCGTTGC TACAGGCGCG CGGCTTTACC GCCGAAGATT TTGCCCTTTC TCACCCTGGT GGCGCACTCG GCCGCAAACT TTTATTGCGC GTCAGCGATA TCATGCACTC AGGCGACGAG ATTCCGCATG TTCCACACGA TGCTTCACTC CGTGATGCAC TGGTGGAAAT TACGCGCAAA AATCTGGGTA TGACGGTAAT CTGCGAGGCG GATATGAAAA TTCAGGGCAT CTTTACCGAT GGTGACCTGC GCCGCATCTT CGACATGAAT ATTGACTTGA ACAGCGCGCG CATTGCTGAT GTGATGACCG CGGGCGGTAT CCGGGTCGCA CCGCAAACGC TGGCGGTGGA TGCACTTAAC CTGATGCAGT CACGCCACAT CACCTCAGTG CTGGTGGCAG AAAACGATCG TCTGGTCGGG ATCGTCCATA TGCACGATAT GCTGCGGGCT GGCGTGGTTT AA
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Protein sequence | MSQFEQDAHL KQQSDRALSD HATQADHAPQ ADHTRQKSHE LPADFDFQQA GKQVISIERD GLAQLDQYID DNFTLACKKI FDCQGKVVVM GMGKSGHIGC KMAATFASTG TPAFFVHPGE ASHGDLGMVT PHDIVIAISN SGESHEILSL IPVLKRQKVF LICMTSAPES TMGKAADIHL CVHVPQEACP LGLAPTSSTT ATLVMGDALA VALLQARGFT AEDFALSHPG GALGRKLLLR VSDIMHSGDE IPHVPHDASL RDALVEITRK NLGMTVICEA DMKIQGIFTD GDLRRIFDMN IDLNSARIAD VMTAGGIRVA PQTLAVDALN LMQSRHITSV LVAENDRLVG IVHMHDMLRA GVV
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