Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0272 |
Symbol | |
ID | 8131185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 321667 |
End bp | 322167 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644863552 |
Product | PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_003015867 |
Protein GI | 253686677 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.518095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGCGT CGTTAAGTGA AAATAAAATG AACCACGATC CCGTATTGCA ACTCAGCACC GTATTACGTC CTGAGTGCAC CCGAAGCACC GTCCACTGCC AGAGTAAGAA ACGGGCATTG GAAATTATCA GCGAGCTGGC CGCCAGGCAG CTTAATATTC CTTCGCAGAT TATCTTTGAT GCCATCCTGA CCCGGGAGCG GATGGGCAGC ACGGGAATCG GCGGCGGCAT TGCCATTCCT CATGGCAAGC TGGAGGACGA TAATGCACTG GGCGCCATCG GTGTTTTCAT CCAGTTAGAG CAACCTATTG CTTTCGATGC TATTGATAAT CAGGCCGTTG ATCTGCTTTT TGCCTTGCTG GTTCCGGCGG AACAATGTAA AACCCATTTG CATACCCTGT CGCTTGTTGC CAAGCGGCTG GCGGATAAAA CGGTTTGCCG ACGCCTGCGT GCGGCGCAAA GCGATGAAGA GCTGTACCAG ATTATGACGG AAGCCGGTTA A
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Protein sequence | MKASLSENKM NHDPVLQLST VLRPECTRST VHCQSKKRAL EIISELAARQ LNIPSQIIFD AILTRERMGS TGIGGGIAIP HGKLEDDNAL GAIGVFIQLE QPIAFDAIDN QAVDLLFALL VPAEQCKTHL HTLSLVAKRL ADKTVCRRLR AAQSDEELYQ IMTEAG
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