Gene PC1_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0253 
Symbol 
ID8131166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp297549 
End bp298532 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content57% 
IMG OID644863533 
Productrod shape-determining protein MreC 
Protein accessionYP_003015848 
Protein GI253686658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00109654 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGC TTTTTAGCAG GGGACCTTCC CTGCAATTAC GACTTTTTCT TGCTGTCGTT 
ACCGCGATTG TCGTGATCGT TGCGGACAGT CGGCTCGGTT CGTTCGTCAA AATCAGAACG 
TACATGGATA CCGCCGTCAG CCCATTTTAT TTTCTGGCAA ATGGGCCCCG TCAGGTTCTG 
GACAACATGT CCGCCTCACT GGCGACCCGT GAGCAATTAG GCCTTGAAAA TACTGCGCTG 
CGTCAGGAGC TGTTGATGAA AAACAGCGAC CTGTTGATGT TAGGCCAGCT CAAGCAGGAA 
AATGCGCGGT TACGTGAACT GCTCGGCTCG CCGCTGCGTC AGGATGAGCA GAAGATGGTG 
ACGCAGGTGA TGTCTGCCGG AACCGACCCC TACAGCGATC AGGTAGTGAT TGATAAAGGT 
CAGACGAACG GCGTGTATGA AGGGCAACCG GTCATCAGCG ATAAAGGCGT GGTGGGTCAG 
GTTGTGGCGG TTGGGCAGTT TACCAGCCGG GTTTTGTTGA TTTGTGATGT TTCCCACGCG 
CTGCCCATTC AGGTGCTGCG CAACGATATC CGCGTGATTG CTGCCGGTAA TGGCTGCGCC 
GACGATCTGC AACTGGAGCA TTTGCCTAAT AATACCGATA TTCGCGTCGG TGACGTGCTG 
GTCACATCGG GGCTGGGCGG ACGTTTCCCT GAAGGGTATC CGGTCGCGGT TGTGTCATCG 
GTCAAAGCCG ATACACAGCG CGCCTATACG ATTATTCAGG CACGCCCGAC GGCGGGGCTA 
CAGCGCCTGC GCTATCTGTT GTTACTGTGG GGCGTGGAGA ACAACTCCAA TACCTCGTTG 
CCGCCAGCGG AAGTCCATCG GGTTGCCAAT GAGCGACTGA TGCAGATGAT GCCGCAGGTG 
TTACCGTCGC CTGACGACAT GGGGCCTCCG TTGCCTCCTG ATACCGCTGC GCCCACCGTC 
GAGCCGCAGA GAGGCCGCCA ATGA
 
Protein sequence
MKPLFSRGPS LQLRLFLAVV TAIVVIVADS RLGSFVKIRT YMDTAVSPFY FLANGPRQVL 
DNMSASLATR EQLGLENTAL RQELLMKNSD LLMLGQLKQE NARLRELLGS PLRQDEQKMV 
TQVMSAGTDP YSDQVVIDKG QTNGVYEGQP VISDKGVVGQ VVAVGQFTSR VLLICDVSHA 
LPIQVLRNDI RVIAAGNGCA DDLQLEHLPN NTDIRVGDVL VTSGLGGRFP EGYPVAVVSS 
VKADTQRAYT IIQARPTAGL QRLRYLLLLW GVENNSNTSL PPAEVHRVAN ERLMQMMPQV 
LPSPDDMGPP LPPDTAAPTV EPQRGRQ