Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0187 |
Symbol | |
ID | 8131087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 216089 |
End bp | 216997 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644863455 |
Product | DNA-binding transcriptional regulator OxyR |
Protein accession | YP_003015783 |
Protein GI | 253686593 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATTC GGGACTTAGA GTATCTTGTC GCGCTGGCAG AACATCGTCA CTTTCGGCGT GCGGCAGATT CCTGCCATGT GAGTCAGCCA ACACTCAGTG GACAGATTCG TAAACTGGAA GATGAACTCG GCGTGATGCT GTTGGAGCGA ACCAGTCGTA AGGTCTTGTT TACGCAAGCT GGGCTGCTGC TGGTCGAGCA GGCACGAACG GTATTACGCG AGGTTAAGGT ACTTAAAGAG ATGGCGAGCC AGCAGGGCGA AACCATGTCC GGGCCGCTAC ATATCGGCTT GATCCCCACG GTGGGGCCTT ACCTGCTGCC GCAAATCATT CCAATGCTGC ATCGCACCTT TCCCAAGCTC GAAATGTATC TGCACGAAGC GCAAACCCAT CAGTTGTTGG CCCAGTTGGA CAGCGGCAAA CTGGACTGCG CCATTCTGGC GATGGTGAAA GAGTCCGAAG CCTTTATCGA AGTCCCCCTC TTCGACGAGC CGATGAAGCT GGCTATTTAT CAGGATCACC CGTGGGCGAA TCGCGAGCGC GTAGCAATGT CCGATCTGGC GGGTGAAAAA CTGCTGATGC TGGAAGACGG CCACTGCCTG CGCGATCAGG CCATGGGCTT CTGTTTTCAG GCTGGAGCGG ACGAAGATAC GCATTTCCGG GCAACCAGTC TGGAGACGCT GCGTAACATG GTCGCCGCTG GAAGTGGGAT TACGCTGCTG CCGTCGTTAT CGGTTCCGCA TGAACGCGAA CGCGACGGCG TCTGCTATTT ACCGTGCTAT AAACCGGAGC CCAAACGCAC GATTGCGCTG GTGTATCGCC CCGGTTCACC GCTGCGCGGA CGCTATGAGC AGCTTGCTGA TACCATCCGC GAGCATATGC AGGGCTATAT GGAAAACCTG TCAAAATAA
|
Protein sequence | MNIRDLEYLV ALAEHRHFRR AADSCHVSQP TLSGQIRKLE DELGVMLLER TSRKVLFTQA GLLLVEQART VLREVKVLKE MASQQGETMS GPLHIGLIPT VGPYLLPQII PMLHRTFPKL EMYLHEAQTH QLLAQLDSGK LDCAILAMVK ESEAFIEVPL FDEPMKLAIY QDHPWANRER VAMSDLAGEK LLMLEDGHCL RDQAMGFCFQ AGADEDTHFR ATSLETLRNM VAAGSGITLL PSLSVPHERE RDGVCYLPCY KPEPKRTIAL VYRPGSPLRG RYEQLADTIR EHMQGYMENL SK
|
| |