| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0169 |
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| Symbol | |
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| ID | 8131069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 197207 |
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| End bp | 199405 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863438 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_003015766 |
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| Protein GI | 253686576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTCG CTCAGGTCGC TTTGCCCGTG CCGCTGGCAC GTACATTCGA TTATTTGCTA
CCCGCCGGAG GCATCGCTCC GCAGGTCGGC GCGCGCGTCA GCGTCTCCTT TGGTAACCGT
AAAGCTATCG GTATTATTAC CGCGCTGAGC GACACCAGCG AGCTTCCGCT TGAACAATTA
AAACCCGTGC ATGATGTGCT GGACGAGCAG CCGCTGTTTC CCCCCAGCCT GTGGCGCATT
CTGCTGTGGG CAGTTGAGTA TTATCACTAC CCGATTGGCG AAGTGCTGTT TCACGCGCTG
CCGATCCTCC TACGCCAAGG GAAACCCGCA CACCGTGCCC CGCTCTGGCA GTGGTTTGCC
ACCGAGCAAG GCCGGGCGAC GCCGCTCAGC ACGCTCAAAC GCGCTGTGAA GCAGCAGCAA
GCGTTAGCGG CTTTACTTCA GTCGCCGATT TATCGCCACC AGGTGAGCGA AATCGGGCTA
ACGGAAACGG CGTTGCAGGC ACTGCGTAGC AAAGGGCTAT GCGAATTACA GGCTGCGGAG
CAAACGCTTC ATGACTGGCG TCAAAACTTT AGTCTGTCAA CTGACCGGCT GCGTCTGAAT
ACCGAACAGG CTACTGCCGT CGGTGCGATC CGCAGCGAAG ATAACCACTT TGCCGCCTGG
CTGCTCGCGG GTATCACTGG TTCGGGCAAA ACCGAAGTCT ATCTCAGCGT GCTGGAAAAC
GTGCTGGCGC AGGGCAAGCA GGCGCTGGTG TTAGTGCCAG AAATTGGCCT GACGCCGCAA
ACCATCGCCC GCTTTCGCGA ACGTTTTAAC GCCCCGGTGG ATGTGCTGCA CTCTGCACTC
AACGACAGCG AACGCTTGGC CGTCTGGCTA CGCGCCCGCA GTGGCGAGGC CGCCATCGTT
ATCGGGACGC GATCAGCGCT ATTTACTCCC TTTGCCCGTT TGGGACTGAT TGTGATCGAT
GAAGAACACG ACAGCTCCTA TAAACAGCAG GAAGGCTGGC GCTATCACGC CCGCGATTTA
GCGGTATTCC GCGCCAGAGA GGAAGACATT CCCATCGTTA TGGGGACGGC GACACCCGCG
CTGGAAACGC TGTATAACGT CCAGATCGGC AAATACCGTC GCCTAAACCT GACCAAACGA
GCGGGCAATG CCGCGCTGGC CAAACAGCAC GTTATCGATC TGAAAGGGCT GCCGCTGACG
GCAGGGTTAT CTCAACCGCT GATTACTCGC ATCCGCCATC ATTTGACGAA CGATAATCAG
GTTATCTTGT TCCTTAATCG GCGCGGATTC TCCCCGGTGG TGATGTGCCA CGAATGCGGC
TGGATTGCCG AATGCCAGCG CTGCGATCAC TACTATACCT ACCACCAGCA TCAGAAGATG
TTGCGCTGCC ACCACTGCGA CAGCCAGCGC CCGGTGCCGC AGCAGTGCCC CAGTTGCGGC
TCGACGAATA TGGTGCCCGT CGGTCTGGGT ACCGAGCAGC TTGAGCAAAG CCTTGCCCCG
ATCTTTCCAA ATGTTCCGAT CACCCGCATT GACCGTGATA CCACCAGCCG CAAAGGCGCG
CTGGAGCAGC AGCTCTCGCA GGTCAGGCAA GGCGGAGCAC GTCTTCTCAT CGGCACCCAG
ATGTTGGCGA AAGGCCACCA CTTCCCTGAC GTAACGCTGG TTGCCCTGCT GGATGTGGAC
GGTTCGCTGT TCTCCGCCGA CTTCCGCGCG GCCGAACGCT TTGCCCAGCT CTATACTCAG
GTGGCAGGTC GTGCGGGACG CGCGGGCAAG GCGGGTGAAG TGGCGCTGCA AACACACCAC
CCGGAACATC CGCTATTACA AACTCTGCTA CAACAGGGCT ACGATGCCTT TGCCAGCCAG
GCACTTACCG AGCGGAAAAG CGTCTTTCTG CCGCCATTTA CCAGCCATAT CCTCTTCCGC
GCCGACGATC ACGATAATCA GCAGGCCGCG TTATTCCTCC AGCAACTGCG TAATTTGCTG
GAAGCGAGCC CGCTGCGGGA TGAATCGCTC TGGCTGCTGG GCCCGGTCCC CGCTTTGCAA
CCCAAACGCG CGGGGCGTTT CCGCTGGCAA CTCTTGCTAC AGCACCCTTC CCGAGCGCTC
TTACAGAAAC TGGTCAGAAC CTCGATGGCG CTGATCGGCA CGCTGCCGCA GGCACGTAAA
GTGAAATGGA TGCTGGATGT CGACCCCACG GACAGTTAG
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| Protein sequence | MSVAQVALPV PLARTFDYLL PAGGIAPQVG ARVSVSFGNR KAIGIITALS DTSELPLEQL
KPVHDVLDEQ PLFPPSLWRI LLWAVEYYHY PIGEVLFHAL PILLRQGKPA HRAPLWQWFA
TEQGRATPLS TLKRAVKQQQ ALAALLQSPI YRHQVSEIGL TETALQALRS KGLCELQAAE
QTLHDWRQNF SLSTDRLRLN TEQATAVGAI RSEDNHFAAW LLAGITGSGK TEVYLSVLEN
VLAQGKQALV LVPEIGLTPQ TIARFRERFN APVDVLHSAL NDSERLAVWL RARSGEAAIV
IGTRSALFTP FARLGLIVID EEHDSSYKQQ EGWRYHARDL AVFRAREEDI PIVMGTATPA
LETLYNVQIG KYRRLNLTKR AGNAALAKQH VIDLKGLPLT AGLSQPLITR IRHHLTNDNQ
VILFLNRRGF SPVVMCHECG WIAECQRCDH YYTYHQHQKM LRCHHCDSQR PVPQQCPSCG
STNMVPVGLG TEQLEQSLAP IFPNVPITRI DRDTTSRKGA LEQQLSQVRQ GGARLLIGTQ
MLAKGHHFPD VTLVALLDVD GSLFSADFRA AERFAQLYTQ VAGRAGRAGK AGEVALQTHH
PEHPLLQTLL QQGYDAFASQ ALTERKSVFL PPFTSHILFR ADDHDNQQAA LFLQQLRNLL
EASPLRDESL WLLGPVPALQ PKRAGRFRWQ LLLQHPSRAL LQKLVRTSMA LIGTLPQARK
VKWMLDVDPT DS
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