Gene PC1_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0164 
Symbol 
ID8131064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp191771 
End bp192697 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content55% 
IMG OID644863433 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_003015761 
Protein GI253686571 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTAT CAACCCATAG CAGCAAAACC AAAGCCTGGC TGGATAGTCT GCGTCCAAAA 
ACGTTGCCAT TAGCTTTCGC ATCTATCGTC ACTGGCTCGG CGATTGCGAG CTGGCATAGC 
AGCTTTAAAC CGGGCGTAGC ATTACTGGCG TTGTTGACCG CCGGACTGCT GCAAATCCTT 
TCCAATCTGG CTAACGACTA TGGGGATGCG GTAAAAGGCA GCGATACCGA GGACCGTATC 
GGGCCGCTGC GCGGCATCCA GACCGGTGCC ATTACGCTGA CGCAGCTGCG CAATGCGCTG 
ATCGTGACGG TCGTGCTTAC CATCATTTCC GGCGTGAGTC TGGTGATTCT GGCGTGTGAA 
AAGCCGGCGG ATATCTTTGG TTTCCTGATT CTGGGGCTGC TGGCGATTTT CGCCGCCATC 
ACCTATACCG TCGGTAATAA ACCCTATGGC TACATTGGGC TCGGCGATAT CTCGGTGCTG 
ATCTTTTTCG GCTGGCTCAG CGTCGCCGGG TCGTATTATC TGCAAACCGG CCACTTCGAC 
AGCATCGTCA TGCTGCCTGC GACGGCCTGC GGTCTGTTGG CAACGGCAGT ATTGAACATC 
AACAACCTGC GCGATATCGA CAACGATCGC ATCAGTGGCA AGAACACGCT GGCTGTGCGC 
CTCGGCGCGG AAAAAGCGCG TTTCTACCAC ACGATGCTGC TGTTGCTGGC GCCGGTTTGT 
CTCGGTCTGT TCGCAACATT TTATCTGCAC AGCTTGGCGG GCTGGCTTTT TATTCTGACG 
CTCCCGTTGC TGATTAAACA GGCGCGCTAT GTGCTGCGTG AAACCAGCGC ATTTAGCATG 
CGTCCGATGT TGGAAAAAAC GGTGAAAGGC GCGCTGCTGA CCAACATTCT GTTCGCCGTT 
GGCGTGATAC TGAGTTCGTG CGGGTAA
 
Protein sequence
MTLSTHSSKT KAWLDSLRPK TLPLAFASIV TGSAIASWHS SFKPGVALLA LLTAGLLQIL 
SNLANDYGDA VKGSDTEDRI GPLRGIQTGA ITLTQLRNAL IVTVVLTIIS GVSLVILACE 
KPADIFGFLI LGLLAIFAAI TYTVGNKPYG YIGLGDISVL IFFGWLSVAG SYYLQTGHFD 
SIVMLPATAC GLLATAVLNI NNLRDIDNDR ISGKNTLAVR LGAEKARFYH TMLLLLAPVC 
LGLFATFYLH SLAGWLFILT LPLLIKQARY VLRETSAFSM RPMLEKTVKG ALLTNILFAV 
GVILSSCG