Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0146 |
Symbol | |
ID | 8131046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 176370 |
End bp | 177233 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644863416 |
Product | TonB family protein |
Protein accession | YP_003015744 |
Protein GI | 253686554 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAT TACTCTATGC GGGAGCGGTG TCAGGATCCC GGTCTTATTC ACCGGAGCCG ACTCCGCACG CCAGCCGGGT GAACGGCGTC GTGCAGTCGC GCGTGCCGGC GTTGAATACG ACGGTTTCGT CCCGACCGGA GCGTTGGCTG GCGGCGATCG CAACGTTGCT ATTGCACGCG GCAGTATTGG CGTTATTCAG TAGCGCGTCG ACACCGCCTG TTACGGTACC AGCCCGGCCA CAGCCTATCA GCATCGAACT GGTTGCGGCG GTTGCCGAGC CGGTACTGCA AGCCGAGCCG GCTGAACCTG AAGTCGTAGC CCCTCCGCCG GAACTCACTC CGCCCGTCGT CGACAAGCCA GTGGATGACA ACGCGCTATT GCCGCCGGAA CCTGAAAAAA AAGAACCTGA GAGAAAAGCG CCCGAGAAAA AGCCGGAACC CGCGCCGAAA AAGGTCGCGG TGAAAAAGAA CCCGCCCGCG CCGACGCCAA AACCTCAGGC TGAAACGGTA TCGGCAAGTG CCCCGGTCAC GCCAGCTCCG GTGGCGCAAC AGGCGGTCGC GCCACCCGTA GACGCGCCGT TAACGCCGCC GTTGGCGAAT GCGGACTACC TGCATAATCC GGCACCGTCT TATCCCGACG TGGCGATTAG CCGTGGTTAT GAAGGCACCG TACTTCTGAA TGTGCAGGTA CGTGCCGACG GCAAAGTGCA AACCATTCGG ATTCATCAAT CAAGCGGCTA TCCCTCGTTG GACGAGGCAG CCAGAGACAC GGTGCTGCGC TGGTCTTTCG TTCCGGCGCG CCGCGGCAAC CAGCCGGTGA GCGGCTGGGT GGTTGTTCCC GTCGATTTTT CGCTGAACTC ATGA
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Protein sequence | MTELLYAGAV SGSRSYSPEP TPHASRVNGV VQSRVPALNT TVSSRPERWL AAIATLLLHA AVLALFSSAS TPPVTVPARP QPISIELVAA VAEPVLQAEP AEPEVVAPPP ELTPPVVDKP VDDNALLPPE PEKKEPERKA PEKKPEPAPK KVAVKKNPPA PTPKPQAETV SASAPVTPAP VAQQAVAPPV DAPLTPPLAN ADYLHNPAPS YPDVAISRGY EGTVLLNVQV RADGKVQTIR IHQSSGYPSL DEAARDTVLR WSFVPARRGN QPVSGWVVVP VDFSLNS
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