Gene PC1_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0116 
Symbol 
ID8131016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp144481 
End bp145137 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID644863386 
Productputative aldolase 
Protein accessionYP_003015714 
Protein GI253686524 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AACACCACAA CACTGAAGCC GCACTGAACA GCGAGCAGCG CGCACGCGCG 
GAAATGGTCA AACTGGGCGC GTCTTTTTTC CAGCGCGGCT ACGCCACTGG TTCAGCGGGC 
AACCTCTCGT TGCTATTGGA TGATGGCACG CTGTTGGCAA CGCCAACCGG CTCCTGTCTC 
GGCGACCTGG ATGCCGAGCG GTTGTCCAAA GTCAGCCTGA GCGGCGAGTG GATCTCCGGG 
GATAAGCCGT CGAAAGAGGT CAGCTTTCAC CTGTCGATTT ACCGTAACGA CCCCGAATGC 
AAAGCGATCG TCCACCTGCA CAGCACCTAC CTGACGGCGC TCTCATGTCT GGAAGGGCTG 
GATACGCAGG ATGCCATCAA GCCGTTCACG CCCTATGTGG TGATGCGCGT CGGTAAAGTG 
CCCGTCGTCC CTTATTACCG CCCCGGCGAT GCACGGCTCG GTGAAGATCT GGCGAAGCTG 
GCCTCGCGCT ACAAGGCGTT CTTATTGGCT AACCACGGCC CGGTCGTCAC TGGCAAGGAT 
CTGCGTGCGG CGGCGGACAA CATGGAAGAG CTGGAAGAAA CCGCCAAGCT GATTTTTATT 
CTCGATGATC GAAAAATTCG CTACCTCACC GCTGACGATA TTGCAGAGCT CTCTTGA
 
Protein sequence
MSEKHHNTEA ALNSEQRARA EMVKLGASFF QRGYATGSAG NLSLLLDDGT LLATPTGSCL 
GDLDAERLSK VSLSGEWISG DKPSKEVSFH LSIYRNDPEC KAIVHLHSTY LTALSCLEGL 
DTQDAIKPFT PYVVMRVGKV PVVPYYRPGD ARLGEDLAKL ASRYKAFLLA NHGPVVTGKD 
LRAAADNMEE LEETAKLIFI LDDRKIRYLT ADDIAELS