| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0102 |
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| Symbol | |
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| ID | 8131002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 125319 |
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| End bp | 126176 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863372 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_003015700 |
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| Protein GI | 253686510 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.911847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAG ATATGCAAAC TTTCACCTTA GTTCCCCAGG GCAGTCTGGA AGGGTATATT
CGTGCCGCCA ATGCCTATCC GATGCTGACG GCGGAGGAAG AGCGGGCGCT GGCTGAACGG
CTGCATTATC AGGGCGATCT GGATGCGGCT AAGCACCTGA TTCTGTCACA CCTGCGTTTT
GTTATTCACG TTGCCCGTAA CTATTCCGGC TACGGCCTGC CGCAGGCGGA CCTGATTCAG
GAAGGGAACA TCGGCCTGAT GAAGGCGGTA CGTCGCTTTA ACCCTGAAGT GGGCGTGCGT
CTGGTTTCTT TCGCCGTGCA CTGGATCAAA GCAGAAATTC ATGAATACGT GCTGCGTAAC
TGGCGTATCG TGAAAGTCGC GACCACCAAA GCACAGCGTA AACTGTTCTT TAACCTGCGG
AAGACGAAAA CGCGTCTCGG TTGGTTTAAC CAAGATGAAG TCGAACTGGT GGCACGTGAA
CTGGGTGTGA CCAGCAAAGA CGTGCGCGAG ATGGAATCCC GTATGGCGGC GCAGGACATG
ACGTTCGATC CAACGCCGGA AGAAGATTCG CACGACGGTA AGGCGATGTC GCCGATGCTT
TACCTACAAG ATAAATCGTC TGACTTTGCC GACGGCATTG AAGAAGATAA CTGGGACACG
CATGCGGCGG ATAAGCTCAC TTACGCGCTG GAAGGGCTGG ATGAACGCAG CCAGCATATT
ATCCGTGCCC GTTGGCTGGA TGATGACAAC AAATCCACCT TGCAGGAACT GGCCGATCAA
TACGGCGTTT CCGCAGAGCG TGTTCGTCAG TTAGAAAAGA ATGCGATGAA AAAACTGCGA
GCGGCGATAG AAGCGTAA
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| Protein sequence | MTKDMQTFTL VPQGSLEGYI RAANAYPMLT AEEERALAER LHYQGDLDAA KHLILSHLRF
VIHVARNYSG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKTRLGWFN QDEVELVARE LGVTSKDVRE MESRMAAQDM
TFDPTPEEDS HDGKAMSPML YLQDKSSDFA DGIEEDNWDT HAADKLTYAL EGLDERSQHI
IRARWLDDDN KSTLQELADQ YGVSAERVRQ LEKNAMKKLR AAIEA
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