Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0098 |
Symbol | rsmD |
ID | 8130998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 120939 |
End bp | 121514 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644863368 |
Product | 16S rRNA m(2)G966-methyltransferase |
Protein accession | YP_003015696 |
Protein GI | 253686506 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA AAAACGCATC GTCAGCCGCC GGACAAATCC GAATCATCGG TGGTCAATGG CGCGGCAGAA AACTTCCGGT TCCTGATAGC CCCGGTTTAC GTCCCACCAC CGACCGCGTG CGGGAAACGC TGTTTAACTG GCTGGCTCCC ATCATTCAAC AGGCACGCTG CCTGGACTGT TTCGCTGGCA GCGGCGCACT CGGGCTGGAA GCCTTATCTC GTTATGCTGC TCACGCCACA TTATTGGAAA TGGAACGTGC AGTCGCCCAG CAATTAACGC AAAATCTGGC GCTGCTTCGG GCGGAAAATG CTGAGGTGGT CAATACTGAT GCCCTGAGCT GGCTGGCGCA GCCTGGTACG CCGTTTGACG TCGTGTTTCT CGACCCACCG TTTCGCAAAG AGCTGCTGAA CAACACGCTC GTGCTGCTGG AACAACAGGG CTGGCTAGCA CCCGATGCGT GGATTTACGT GGAAACCGAG GCGGAAAATG CGCAGCTGAC TATCCCAGAA AATTGGCAAC TGCACCGTGA GAAAATTGCA GGTCAGGTCG CCTACCGTTT GTACATCCGT CAGTGA
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Protein sequence | MAKKNASSAA GQIRIIGGQW RGRKLPVPDS PGLRPTTDRV RETLFNWLAP IIQQARCLDC FAGSGALGLE ALSRYAAHAT LLEMERAVAQ QLTQNLALLR AENAEVVNTD ALSWLAQPGT PFDVVFLDPP FRKELLNNTL VLLEQQGWLA PDAWIYVETE AENAQLTIPE NWQLHREKIA GQVAYRLYIR Q
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