| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0087 |
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| Symbol | |
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| ID | 8130987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 112331 |
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| End bp | 113347 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863357 |
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| Product | ribonuclease |
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| Protein accession | YP_003015685 |
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| Protein GI | 253686495 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTAC CGGCAGACCC GGATCGCCAA TCAACATCGT CAACCCCAGA AGGGGACACA
TCGCCGCAGA AACCCCTCTC GTTTCTGGAT AAGAGCAAAC GTCTGGCCGC ACGTATTCAG
GCGATTCCCA GCGTGGCACA CCTGATCCGC GCGGGCGAAC GCTTCAACGA TAGGATGGGC
AACCAGTTTG GTGCGGCCAT TACCTATTTT TCCTTCCTGT CGCTGATTCC CATTCTCATG
GTGTCGTTTG CCGCCGTCGG TTTTGTGTTG GCCTCCAACC CCGACCTGCT GACGGGGCTG
ATTAACCGTA TCGTCAACAG CATCAGCGAT CCTAATCTGG CCAATACGCT GAAAAATACC
GTCAACACGG CCGTGCAGCA GCGTACCACC GTCGGGATTA CCGGCTTGCT GATTGCGCTC
TATTCCGGCA TCAGTTGGAT GGGAAATCTG CGTGAAGCGA TTCGCGCCCA GTCGCGCGAC
GTGTGGGAGA GGAGCCCGAA AGATGAAGAG AAGATTTACT TTCAGTACAC GCGGGATTTT
CTGTCGCTAA CTGGCCTGGT CATTGCGCTG ATTATTACGC TGTTCCTGAC CTCCGTTGCC
GGCACCGCGC AAAACATGAT TGTGACCGCG CTGGGACTGG ATGGCATTGA GTGGCTGCGC
CCCGCGTTGA CGCTGATTGC CCTGTCGATC TCCATCTTCG CCAACTATCT GTTATTCCTG
TGGATATTCT TCGTTTTACC GCGCCATAAA CCCAAGCGTA AAGCGCTCTT TCGCGGCACA
CTGATCGCCG CCGTAGGCTT TGAAGTCATC AAGTTTGCGA TGACCGTCGC GCTGCCTAAA
CTGGCCAGCT CGCCTTCCGG TGCCGCGTTC GGTTCGGTGA TTGGTCTGAT GGCATTTTTC
TATTTCTTCG CGCGTCTGAC GCTCTTCTGC GCCGCCTGGA TCGCCACGGC AAACTATAAA
GGTGACACCT CGACAGACCG GAATGAGCAG GAAAAAGAAC CGCCTTCCGA TCGTTAA
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| Protein sequence | MPVPADPDRQ STSSTPEGDT SPQKPLSFLD KSKRLAARIQ AIPSVAHLIR AGERFNDRMG
NQFGAAITYF SFLSLIPILM VSFAAVGFVL ASNPDLLTGL INRIVNSISD PNLANTLKNT
VNTAVQQRTT VGITGLLIAL YSGISWMGNL REAIRAQSRD VWERSPKDEE KIYFQYTRDF
LSLTGLVIAL IITLFLTSVA GTAQNMIVTA LGLDGIEWLR PALTLIALSI SIFANYLLFL
WIFFVLPRHK PKRKALFRGT LIAAVGFEVI KFAMTVALPK LASSPSGAAF GSVIGLMAFF
YFFARLTLFC AAWIATANYK GDTSTDRNEQ EKEPPSDR
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