Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0081 |
Symbol | |
ID | 8130981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 103954 |
End bp | 105615 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863351 |
Product | cellulose synthase operon protein YhjU |
Protein accession | YP_003015679 |
Protein GI | 253686489 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03368] cellulose synthase operon protein YhjU |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAA AAACACGCTT GCAGCAACCG CATATGCAAA AACAGCAGAA TCTATGGCGC TACTGGCGTG GGCTCGGTGC CTGGAATTTG TATTTCTTGC TGAAATTTGC CCTGTTATGG TTTGGCTACC TGAATTTTCA TCCGCTGCTT AATCTGGTCT TTCTGGCCTT TCTGCTGTTC CCGATCCCCA ACGTTACGCT GCACCGCTGG CGGCATATTA TTGCTATCCC ACTCGGTATC GGGCTGTTTT ACCATGACAC CTGGTTGCCG GGTATCAACA GCATTGTTAG TCAGGGAACG CAGGTCGCTG GCTTTAGCGC GTCGTATTTG CTGGAGCTGT TAACTCGCTT CATTAACTGG CAAATGGTCG GCGCGGCGGT GGTCATTACC GTGGCTTACC TGTTCTTCGC GCAGTGGATT CGTATTACGG TGTTTACCGT GGCGGCGCTG GCGTGGTTAA ACATCGTCAA TTTGGCAGGG CCTGCTGTTT CGCTGATGCC TGCGGCATCG ACGACGACGG CCCCCTCGGC GGCGACTTCC CCAACGGGGG GAGATGCGGC GTTACCTGAA GCGACATTAC CGCCAACGAA CGCGAACCTA ACGGCTTACC TGAATCAGTT TTATACGCGA GAAAAAGCAC GAACCACGGC GTTCCCTGCC GCACTGCCGC AGGATGCACA GCCTTTTGAT CTCCTGATTA TCAATATTTG TTCGCTGTCG TGGTCGGATC TGGACGTGGC GCAGTTGGAC AATCACCCGC TGTGGAAGAA ATTCGATATC CTGTTCCGTC AGTTTAACTC TGCCACCGCT TACAGCGGGC CTGCATCCAT TCGCCTGCTG CGCGCAAGCT GCGGCCAGCA GTCCCACACT GATTTGTATC AGCCGGTGAA TCAACAGTGC TACCTGTTCA GCAATTTGGT GAAGCTGGGT TTTGAAGAAC AACTGATGCT CGATCATTCC GGCGTCTTTG GTAATTACCT GCGTGAAGTA CGGGAAGAGG GCGATATTCA GATCCCAATG CTGTCGCAGG AAGGCATTAG CCACCAGATT ACCTCGTTCG ACGGCGAACC GATTTATAAC GATCTGGAAC TGCTAAATCG CTGGCTGGGC GAGCGGGATA AAGCGACAAC GACGCGTAAC GCAACCTTCT TTAACCTGAT CCCACTGCAT GACGGCAACC GCTTTGTCGG CACCAACCAG TCGGCGGACT ATGCGCCACG TGCGAAGATT CTGTTTGACC AACTGGATGC GTTTTTTGAT GTGTTGCAGA AATCCGGTCG CAAAGTGATG GTGGTGGTGG TGCCGGAGCA CGGCGCGGCG CTGGCCGGGG ATAAGATGCA AATGTCCGGG CTGCGCGATA TTCCCAGCCC GAGCATCACG CATATTCCTG TCGGTGTGAA ACTGTTTGGC CTACAGGCTC CGCATCAGGG CAACGCGCTG GAGGTGACGT CGCCGAGCAG CTATCTGGCG ATTTCGGAAC TGGTGGCGCG AATGGTGGAT GGCAAAGTGT TCACCGCGCC TTCTGTTGAC TGGCAAACGC TAACGAGCGC CTTGCCGCAA ACGGAAGCGA TCTCGGAAAA TGAGAACGCT ATCGTGATGC AATATCAGGG AAAACCCTAC ATTCGTCTGA ACGGCGGAGA CTGGGTGCCT TACCCGCAAT AA
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Protein sequence | MDEKTRLQQP HMQKQQNLWR YWRGLGAWNL YFLLKFALLW FGYLNFHPLL NLVFLAFLLF PIPNVTLHRW RHIIAIPLGI GLFYHDTWLP GINSIVSQGT QVAGFSASYL LELLTRFINW QMVGAAVVIT VAYLFFAQWI RITVFTVAAL AWLNIVNLAG PAVSLMPAAS TTTAPSAATS PTGGDAALPE ATLPPTNANL TAYLNQFYTR EKARTTAFPA ALPQDAQPFD LLIINICSLS WSDLDVAQLD NHPLWKKFDI LFRQFNSATA YSGPASIRLL RASCGQQSHT DLYQPVNQQC YLFSNLVKLG FEEQLMLDHS GVFGNYLREV REEGDIQIPM LSQEGISHQI TSFDGEPIYN DLELLNRWLG ERDKATTTRN ATFFNLIPLH DGNRFVGTNQ SADYAPRAKI LFDQLDAFFD VLQKSGRKVM VVVVPEHGAA LAGDKMQMSG LRDIPSPSIT HIPVGVKLFG LQAPHQGNAL EVTSPSSYLA ISELVARMVD GKVFTAPSVD WQTLTSALPQ TEAISENENA IVMQYQGKPY IRLNGGDWVP YPQ
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