Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0059 |
Symbol | |
ID | 8130959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 69804 |
End bp | 70826 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644863329 |
Product | Alcohol dehydrogenase GroES domain protein |
Protein accession | YP_003015657 |
Protein GI | 253686467 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACAA TGAATACATT GATTTGCCAG GAACCAAAAA AACTTATCTG GAAAAAACGT GAAATACCTA TTCCGGGTGA AGGTGAAACA TTAATTAAAA TTAAGTCTGT GGGTATTTGT GGCACAGATA TTCATGCCTG GGGAGGGAAT CAACCCTTTT TTAGCTACCC ACGCGTATTA GGCCACGAAA TATGTGGAGA GGTTGTCGAT ACGGGCAAAA ATGTACATCA ATTTAAAAAA GGCCAGCAGG TTGCCGTCAT TCCCTATGTC GCCTGTCAGC AATGTCCTGC CTGCAAGAGC GGCCGTACCA ACTGCTGCGA GAAAATTTCA GTGATTGGTG TACATCAGGA TGGCGGATTT AGCGAATATC TGGCGGTGCC CGCCACAAAC GTATTGCTTG CAGAAGGGAT CGACCCACAG GCGGCGGCGT TAATCGAGCC CTACGCCATT AGTGCGCACG CCGTTCGTCG GGCAAAGGTG CTACAAGGTG AACAGGTGCT GGTCGTCGGT GCCGGACCGA TTGGCCTTGG CGCAGCAGCC ATCGCCAAAG CAGACGGCGC TCACGTGGTT GTCGCAGACA CCAGTGCAGC CCGCCGCGAG CACGTTATTG CCCACCTGAA TCTTTCGGTC GTCGATCCCT CAGCCGAGGA TTTTGAGGCC CAGCTACGCG CCGAATTTGG CGGTTCGCTG GCAGAAAAAG TCATCGATGC CACGGGAAAT CAGCATGCGA TGAACAACAC CATTAACCTG ATCCGCCACG GTGGCAGCAT CGTGTTTGTC GGTCTGTTTA AAGGTGATTT ACAGTTCTCC GATCCTGACT TCCATAAGAA AGAGACCACG ATGATGGGCA GTCGTAACGC CACACCGGAA GATTTCTCCA AGGTAGGACG TTTGATGTCT GAAGGTAAAC TCACCGCAGA AATGATGCTG ACGCACCGTT ATTCCTTTTC CACACTGGCT GACATCTATG AAAAGGATGT CATTAACAAC CGTGAGCTGA TCAAAGGCGT CATCACATTT TAA
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Protein sequence | MSTMNTLICQ EPKKLIWKKR EIPIPGEGET LIKIKSVGIC GTDIHAWGGN QPFFSYPRVL GHEICGEVVD TGKNVHQFKK GQQVAVIPYV ACQQCPACKS GRTNCCEKIS VIGVHQDGGF SEYLAVPATN VLLAEGIDPQ AAALIEPYAI SAHAVRRAKV LQGEQVLVVG AGPIGLGAAA IAKADGAHVV VADTSAARRE HVIAHLNLSV VDPSAEDFEA QLRAEFGGSL AEKVIDATGN QHAMNNTINL IRHGGSIVFV GLFKGDLQFS DPDFHKKETT MMGSRNATPE DFSKVGRLMS EGKLTAEMML THRYSFSTLA DIYEKDVINN RELIKGVITF
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