Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0042 |
Symbol | |
ID | 8130942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 46614 |
End bp | 47012 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644863313 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003015641 |
Protein GI | 253686451 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAA ATTCAGCGAC TGAGAGAAAG GAAACTGAGG CAGGTGAGCA GCGTTATAAC GTTTATTTAC AAGGCTGTCC GGCGAGAATG GTGCTTGAAC GTTTGGCGGA TAAATGGGCG TTGCTGATAG TCGGTTTGCT GAGAACAGGG CCGCTGAGAT TTAACCAATT GCGGCGGGAA ATTGAAGGGG TATCGCAGAA AGCGCTGAGC CAAACGCTGA AGAAACTGGA GCGGGACGGT CTGCTTTCCC GAAAGGCATT CCCGACGGTG CCGGTTACGG TGGAATATGC GCTGACCCCG TTGGGTAAAA CCTTATCGGA AGCCGTTGAA CCGCTGGCCA GGTGGGCCGA GAAAAATATC GAAGACGTTT TATTGGCGCA GTCGCACTAT GATCAATAA
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Protein sequence | MTKNSATERK ETEAGEQRYN VYLQGCPARM VLERLADKWA LLIVGLLRTG PLRFNQLRRE IEGVSQKALS QTLKKLERDG LLSRKAFPTV PVTVEYALTP LGKTLSEAVE PLARWAEKNI EDVLLAQSHY DQ
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