| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0036 |
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| Symbol | |
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| ID | 8130936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 39247 |
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| End bp | 40905 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863307 |
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| Product | hypothetical protein |
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| Protein accession | YP_003015635 |
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| Protein GI | 253686445 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA TCGCACTTAC CGTGAGTATG CTGGCGCTGG TTGCGGTTCT GGGGTTATGG
ATCGGCAACT GGCGGATTTA TGGCGTCGGT TTAGGGATTG GCGGGGTCCT GTTTGGTGGG
ATCATCGTCG GGCATGTTGC CCATCAGTAT CAGATTCAAC TGAATGATGA CATGTTGCAC
GTCATTCAGG AGTTCGGACT GATTCTGTTT GTCTATACCA TTGGCATTCA GGTCGGGCCG
GGCTTCTTTT CCTCTTTGCG CGTATCTGGC CTGCGCCTCA ATGCATTCGC CTTGCTGACG
GTGTTCCTCG GCTGCGTGGT GACCGTCCTG CTGCATAAAC TGCTTAATAT TCCTTTGCCT
ATCATCCTCG GTATTTTTTC CGGTGCGGTG ACCAATACCC CGTCGCTGGG CGCGGGTCAG
CAGATTTTGA CCGATCTCGG TTCGAGCGCG GCATTGGTTA ACCAGATGGG GACGGGCTAC
GCGATGGCGT ATCCGCTCGG GATCTGCGGC ATTTTACTGG TGATGTGGCT GATGCGCGTG
CTGTTTCGCG TCGCGGTGGA GAACGAAGCT AAGCAGTTTG AGGTCAGTAA CGGCCAGCAC
CATGAACAGC TGCACACCAT GAATGTGTCG GTGACGAATA CCAATCTGCA AGGGCTGGCG
ATTCAGGATG TGCCAATTCT GAACCGCGAC ACCATCGTCT GTTCCCGTTT AAAACGCGGC
GATGAGCTAA TGGTGCCGTC GCCGCAGACG CTCATCCAAC TGGGTGACTA TCTGCATCTG
GTTGGCGCGA AAAACGATCT TGAGCAGGCG CGGCTGGTTA TCGGTCATGA AGTGGAGACA
TCGCTCTCGA CGCGCGGTAC GGATCTGCAC GTTGAGCGCG TGGTGGTGAC GAATGAGAAG
GTGCTGGGAC GCAAGATTCG CGAACTCAAT CTGAAGCAAA ACTACGATGT TGTGATTTCA
CGCCTGAATC GTGCGGGCGT TGAGCTGGTC GCCAGCAACC AGGCCAGCCT GCAATTTGGC
GACATTCTGA ATCTGGTCGG GCGGAAAACG GCGATCGATG CCGTTGCGGA TATCGTGGGG
AACGCGCAGC AAAAACTCCA GCAGGTACAG ATGCTGCCCG TTTTTATCGG CATTGGGCTG
GGTGTGTTGC TGGGTTCTGT CCCGCTGATG ATTCCCGGTT TTCCCGTCGC GCTGCGGCTC
GGTCTGGCGG GCGGGCCGTT GGTGGTGGCA CTGGTTCTGG GACGCATTGG CGGTATCGGT
AAACTGCACT GGTTTATGCC GCCCAGTGCG AATCTGGCGC TGCGTGAACT CGGTATTGTG
CTGTTCTTGT CGGTGGTAGG GCTGAAATCC GGCGGTGATT TCATTGATAC GTTATTGAAC
GGCGACGGCG TGTGGTGGAT TGGTTACGGT GCGCTGATTA CCATTGTGCC GCTGCTGCTG
GTCGGCATAC TGGCGCGAAC GCTCGGCAAG ATGAACTATT TAACGCTGTG CGGCATGCTG
GCGGGTTCCA TGACCGATCC GCCCGCGTTG GCGTTTGCCA ATGGGTTACA CCCAACCAGC
GGTGCGGCGG CACTGTCTTA TGCGACGGTT TATCCACTGG CGATGTTTCT ACGTATTATG
TCGCCGCAGT TGTTAGCCGT ACTTTTCCTT ACCCTCTAA
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| Protein sequence | MSDIALTVSM LALVAVLGLW IGNWRIYGVG LGIGGVLFGG IIVGHVAHQY QIQLNDDMLH
VIQEFGLILF VYTIGIQVGP GFFSSLRVSG LRLNAFALLT VFLGCVVTVL LHKLLNIPLP
IILGIFSGAV TNTPSLGAGQ QILTDLGSSA ALVNQMGTGY AMAYPLGICG ILLVMWLMRV
LFRVAVENEA KQFEVSNGQH HEQLHTMNVS VTNTNLQGLA IQDVPILNRD TIVCSRLKRG
DELMVPSPQT LIQLGDYLHL VGAKNDLEQA RLVIGHEVET SLSTRGTDLH VERVVVTNEK
VLGRKIRELN LKQNYDVVIS RLNRAGVELV ASNQASLQFG DILNLVGRKT AIDAVADIVG
NAQQKLQQVQ MLPVFIGIGL GVLLGSVPLM IPGFPVALRL GLAGGPLVVA LVLGRIGGIG
KLHWFMPPSA NLALRELGIV LFLSVVGLKS GGDFIDTLLN GDGVWWIGYG ALITIVPLLL
VGILARTLGK MNYLTLCGML AGSMTDPPAL AFANGLHPTS GAAALSYATV YPLAMFLRIM
SPQLLAVLFL TL
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