Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0023 |
Symbol | ssuB |
ID | 8130923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 26163 |
End bp | 26963 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644863294 |
Product | aliphatic sulfonates transport ATP-binding subunit |
Protein accession | YP_003015622 |
Protein GI | 253686432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCTT TTACCGATTC TGCAACACGC GCGCATTCGC CGTCGCCACT CACCAAGGGG ACGCCGCTGG CGCTGGATGC CATTACCAAA CATTACGGCC ACCGCACCGT GCTGAATGAC GTGCAGTTGC GTATTCCTTC CGGGCAGTTT GTTGCCATTG TCGGCCGCAG CGGCTGTGGC AAGAGCACCC TACTGCGTCT GCTTGCGGGG CTGGAAGCCG CCAGCAGCGG AGAACTGTTG ACCGGCACCG CACCGCTCAG TAGTGCGAAA GACGACACGC GGCTGATGTT TCAGGAAGCG CGCCTGCTGC CGTGGAAAAA GGTGATCGAT AATGTCGGGC TGGGACTGCG AGGCAACTGG CGTGAGAAAG CGCAGGAGGC GCTGGCCTCC GTCGGGCTGG CAGATCGCGC CAGCGACTGG CCAGCAGCGC TATCCGGCGG TCAAAAACAA CGCGTCGCGC TGGCACGCGC GCTCATTCAC CATCCGCGTC TGCTGCTGTT GGATGAACCG CTGGGTGCGC TGGATGCCTT AACCCGCATC GAAATGCAAA GCCTGATCGA AAATCTGTGG CTCCAACATG GCTTCACCGT ACTGCTGGTG ACGCACGATG TCTCCGAAGC CATTGCGCTG GCTGACAGGG TGATTCTGAT TGAAGAAGGG CGCGTGGGGC TGGATATTAC AGTCGATTTA CCCCGGCCGC GGCGTCGCGG ATCGGCAAAG CTGGCGGAAC TGGAAGCCCG CGTGCTGGAA CGCGTGCTGG CTCCTGCTTC ATCTCCTCTG CCCCAGCAGG CGGTAATATA A
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Protein sequence | MTAFTDSATR AHSPSPLTKG TPLALDAITK HYGHRTVLND VQLRIPSGQF VAIVGRSGCG KSTLLRLLAG LEAASSGELL TGTAPLSSAK DDTRLMFQEA RLLPWKKVID NVGLGLRGNW REKAQEALAS VGLADRASDW PAALSGGQKQ RVALARALIH HPRLLLLDEP LGALDALTRI EMQSLIENLW LQHGFTVLLV THDVSEAIAL ADRVILIEEG RVGLDITVDL PRPRRRGSAK LAELEARVLE RVLAPASSPL PQQAVI
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