| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0019 |
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| Symbol | |
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| ID | 8130919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 21927 |
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| End bp | 22904 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863290 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003015618 |
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| Protein GI | 253686428 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGCCT ACCTGCTGAG CCGAATCGGA CAAACGCTGC TGACGCTGGC TGTTATGTCG
GTGCTGGTGT TTGTGGGTGT TTATCTGGTC GGTAATCCGG TCGATATGTT GTTGGGCGCG
ACGGCCACGC CAGCGGAACG GCTGGCGGTG ATTCAGTCCT TCGGCCTGGA TAAGCCGGTC
TGGGAACAGT ACGGGTTGTT TGTCTGGAAC GCCTTTCAGG GCGACATGGG CAACTCTTTC
ATCTTTAATC AACCCGCGCT GACGCTGATT TTTCAACGCA TGCCCGCCAC GCTCGAACTG
GCGATGGTGG CGTTTGTGAT GGCGCTGATT GTCGGCATTC CGTTGGGGAT TTACGCGGGT
CTGAAGCCGG ACAGCGCGGT ATCCAAATCC ATCATGACCT TCTCCATCCT CGGTTTTAGC
CTGCCCACGT TCTGGATCGG GTTGGTGATG ATCATGCTGT TCAGTGTGAA GCTGGGCTGG
CTGCCGTCAT CAGGCCGGGG CGATGTCCAT GAGCTGTTCG GGATCCCGTT TAGCTTTCTG
ACCCGCGATG GCCTTGAACA TCTTCTCCTG CCCGCGTTTA ACCTCGCGCT GTTTAAAATC
TCGCTGGTTA TCCGCTTGAT GCGTGCGGGC GTGATGGAGT GTCTGCAACA GGATTATGTG
CAATTTGCTC GCGCGAAAGG GCTGTCGGAA ACCCGAATCG TACTGGTACA TGTGCTGCGC
AACACGTTGA TTCCGTTGAT TACCGTGCTA GGGCTGGAAC TCGGCTCGCT GATCGCGTTT
GCGGTGGTGA CGGAAACCAT TTATGCCTGG CCGGGCATGG GCAAGCTGAT TATCGACTCG
ATCGCCGTGC TCGACCGTCC GGTTATTCTG GCTTATCTGA TGATTACCGT CGTGATGTTC
AGCGTGATTA ACCTGCTGGT CGATTTGCTG TATGTGCTGG TCGATCCACG CGTGCGGCTG
GGAGGAGACA AGGGATGA
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| Protein sequence | MIAYLLSRIG QTLLTLAVMS VLVFVGVYLV GNPVDMLLGA TATPAERLAV IQSFGLDKPV
WEQYGLFVWN AFQGDMGNSF IFNQPALTLI FQRMPATLEL AMVAFVMALI VGIPLGIYAG
LKPDSAVSKS IMTFSILGFS LPTFWIGLVM IMLFSVKLGW LPSSGRGDVH ELFGIPFSFL
TRDGLEHLLL PAFNLALFKI SLVIRLMRAG VMECLQQDYV QFARAKGLSE TRIVLVHVLR
NTLIPLITVL GLELGSLIAF AVVTETIYAW PGMGKLIIDS IAVLDRPVIL AYLMITVVMF
SVINLLVDLL YVLVDPRVRL GGDKG
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