| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0016 |
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| Symbol | |
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| ID | 8130916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 18978 |
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| End bp | 19862 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863287 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_003015615 |
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| Protein GI | 253686425 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATACGT TTAGCGGTGT TTTTCCCTAT CTGGTGTCAC CCGTCAGGCC CGATGGTCAG
GTTGATAAGC CCGTTTTGGC GCAGCTCACT GAACATCTGA TTCAATGCGG TGTACATGGC
GTCGTGCCGT TAGGCAGCAC CGGTGAATTT GCCTATCTCT CTGCGGCTCA ACGTCTGGAT
GTGGTCAAAA CGGTAATTGA GACGACGGCT GGCCGTGTGC CGGTTATCGC TGGTGTCGCG
TCGACAACGA TTCAGGATGC CGTTGAGCAA ACGAAACGCT ACGTCGAACT GGGCGCGGAT
GGCATTCTGG CTGTACTGGA AGCCTATTTC CCCCTGAAAG ACGAGGGCGT CGAGCAGTAT
TTCCGCGCCA TTGCCGAAGC CGCACAGGGT AAACCGGTGG TGCTTTATAC CAATCCTCAG
TTCCAGCGTT CCGATTTGAG TTTGCCCGTC ATCGAACGCC TGAGCCATGT CAGTAATATC
CGCTATATCA AAGACGCCTC GACCAATACC GGGCGCTTGC TTTCCATCAT TGAACGTACC
CGTGGCCGGA TGGACGTGTT CTCCGCATCT GCCCATATTC CCGCCTGCGT CATGCTGATT
GGCGGCGTGG GGTGGATGGC TGGCCCAGCT TGTATCGTTC CCAAACAGAG TATTGCTTTG
TATGAAGCCG CCCGCGCGGG TGACTGGAAC AAAGCAATGG AGCTTCAGCG CCCGCTATGG
CGCATCAATG AAATCTTTGC CCGTTATTCC ATTGCTGGCT GTATTAAAGC GGCGCTGCAA
TTGCAGGGGT TTGCGGTAGG CGATCCGTTG CCGCCCCAAC TGCCGCTGGA TGAAAAGGCA
CGTAAGGAGA TCGCTGACGT TTTAGCGTCT GTCGATTCCC TTTAA
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| Protein sequence | MNTFSGVFPY LVSPVRPDGQ VDKPVLAQLT EHLIQCGVHG VVPLGSTGEF AYLSAAQRLD
VVKTVIETTA GRVPVIAGVA STTIQDAVEQ TKRYVELGAD GILAVLEAYF PLKDEGVEQY
FRAIAEAAQG KPVVLYTNPQ FQRSDLSLPV IERLSHVSNI RYIKDASTNT GRLLSIIERT
RGRMDVFSAS AHIPACVMLI GGVGWMAGPA CIVPKQSIAL YEAARAGDWN KAMELQRPLW
RINEIFARYS IAGCIKAALQ LQGFAVGDPL PPQLPLDEKA RKEIADVLAS VDSL
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