| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0001 |
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| Symbol | dnaA |
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| ID | 8135299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 72 |
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| End bp | 1469 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863272 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_003015600 |
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| Protein GI | 253686410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00156244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCACTTT CGCTTTGGCA GCAGTGTCTT GCCCGTTTGC ATGATGAGTT ACCTGCCACA
GAATTCAGTA TGTGGATACG CCCGTTGCAG GCGGAGCTGA GTGATAACAC TCTGGCGCTC
TACGCCCCCA ATCGTTTTGT GCTGGATTGG GTTCGTGATA AATACTTAAA TAATATCAAT
GTCCTGCTGA ATGATTTTTG TGGGATGGAT GCCCCTTTAC TGCGTTTTGA GGTGGGTAGT
AAACCGCTGG TTCAGGCCAT CAGCCAGCCC GCGCAACCGC ATCATAAGCA GGTCAGTGCT
GCGCCTCAGC AGCAGGTACG CTCAGCGCCA GTACGTCCAA GCTGGGATAA CTCACCCGCG
CAGGCGGAGC ATACCTACCG TTCCAATGTG AACCCCAAAC ATACGTTTGA TAACTTCGTT
GAGGGTAAAT CGAACCAGTT AGCACGTGCG GCGGCGCGTC AGGTGGCTGA TAATCCGGGT
GGCGCCTATA ACCCGTTGTT TCTTTATGGC GGTACCGGCC TGGGTAAAAC GCACCTGTTG
CACGCAGTGG GGAATGGCAT CATTGCCCGT AAACCCAACG CGAAGGTGGT CTACATGCAC
TCCGAGCGTT TCGTGCAGGA TATGGTGAAA GCGTTGCAGA ACAATGCGAT TGAAGAATTC
AAACGCTACT ACCGTTCTGT TGATGCGCTG CTGATCGATG ATATTCAATT CTTTGCTAAT
AAAGAGCGTT CGCAGGAAGA GTTCTTCCAT ACCTTCAACG CGCTGCTGGA AGGCAACCAG
CAAATCATTC TGACGTCTGA CCGCTACCCG AAAGAGATTA ACGGCGTGGA AGATCGTCTG
AAATCCCGCT TCGGCTGGGG GTTAACGGTC GCAATTGAAC CGCCAGAGCT GGAAACCCGC
GTGGCGATTC TGATGAAAAA GGCAGATGAA AATGACATTC GCCTGCCTGG TGAAGTTGCG
TTCTTTATTG CCAAGCGCCT GCGTTCTAAC GTGCGTGAGC TGGAAGGCGC ACTGAACCGC
GTCATCGCGA ACGCCAATTT TACCGGCCGC TCCATCACCA TCGATTTTGT GCGCGAGGCG
CTGCGCGATT TGCTGGCGTT GCAGGAAAAA CTGGTTACTA TCGACAATAT TCAAAAGACC
GTGGCGGAAT ACTATAAAAT CAAGGTAGCC GATCTACTGT CTAAACGTCG TTCCCGCTCG
GTGGCGCGTC CGCGCCAGAT GGCGATGGCG TTGGCGAAAG AACTGACGAA TCACAGCCTG
CCGGAAATTG GTGATGCTTT TGGCGGGCGT GACCATACGA CGGTGTTGCA TGCCTGCCGC
AAGATTGAGC AGTTGCGTGA AGAAAGCCAC GACATCAAAG AAGATTTTTC CAATTTAATC
AGAACTCTAT CGTCATAA
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| Protein sequence | MSLSLWQQCL ARLHDELPAT EFSMWIRPLQ AELSDNTLAL YAPNRFVLDW VRDKYLNNIN
VLLNDFCGMD APLLRFEVGS KPLVQAISQP AQPHHKQVSA APQQQVRSAP VRPSWDNSPA
QAEHTYRSNV NPKHTFDNFV EGKSNQLARA AARQVADNPG GAYNPLFLYG GTGLGKTHLL
HAVGNGIIAR KPNAKVVYMH SERFVQDMVK ALQNNAIEEF KRYYRSVDAL LIDDIQFFAN
KERSQEEFFH TFNALLEGNQ QIILTSDRYP KEINGVEDRL KSRFGWGLTV AIEPPELETR
VAILMKKADE NDIRLPGEVA FFIAKRLRSN VRELEGALNR VIANANFTGR SITIDFVREA
LRDLLALQEK LVTIDNIQKT VAEYYKIKVA DLLSKRRSRS VARPRQMAMA LAKELTNHSL
PEIGDAFGGR DHTTVLHACR KIEQLREESH DIKEDFSNLI RTLSS
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