Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_72640 |
Symbol | |
ID | 4383626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6470308 |
End bp | 6471090 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639328453 |
Product | putative TonB-dependent receptor |
Protein accession | YP_793982 |
Protein GI | 116053655 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGCTTGCTGC TTTCTCCGCT GTCGCGGCGC TCGGCCTCAC CGCCGCCCAG GCCGCCGAGA CCCTCACCGT CGCGGCCACC CCGGTGCCGC ACGCGGAGAT CCTCAATGTG GTCAAGCCGC TGCTGGCCAA GGAAGGCGTG GAACTGATGG TCAAGGAGTT CACCGACTAC GTGCAGCCGA ACGTGCAGGT CTCGGAGAAG CGCCTGGACG CCAACTTCTT CCAGCACCAG CCGTACCTCG ATGAGTTCAA CAAGGCCAAG GGCACCGACC TGGTCGCCGT GACCGGCGTA CACATCGAGC CGCTGGGCGC CTACTCGAGC AAGTACAAGA AGCTCGACGA ACTGCCTTCC GGCGCTACCG TGGTGATCCC CAACGACGCC ACCAACGGCG GCCGCGCCCT GCTCCTGCTG GACAAGGCCG GGGTGATCAA GCTCAAGGAC AACAAGAGCA TCACCGCCAC GCCGAAGGAC ATCGTCGACA ATCCGAAGAA CATCAAGATC CGCGAACTGG AAGCCGCGAC CCTGCCGCGC GTGCTGACCC AGGTCGACAT GGCGCTGATC AATACCAACT ACGCCCTGGA AGCCAAGCTG AACCCGACCA AGGATGCGCT GGCCATCGAA GGCAGCGACT CGCCCTACGT GAACATCCTC GTCGCGCGCC CGGACAACAA GGACAGCGAC GCCATGCAGA AGCTGGCCAA GGCCCTGCAC AGCGCCGAGG TCAAGCAGTT CATCCAGGAG AAGTACAAAG GCGCAGTGGT ACCGGCGTTC TGA
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Protein sequence | MKKLLAAFSA VAALGLTAAQ AAETLTVAAT PVPHAEILNV VKPLLAKEGV ELMVKEFTDY VQPNVQVSEK RLDANFFQHQ PYLDEFNKAK GTDLVAVTGV HIEPLGAYSS KYKKLDELPS GATVVIPNDA TNGGRALLLL DKAGVIKLKD NKSITATPKD IVDNPKNIKI RELEAATLPR VLTQVDMALI NTNYALEAKL NPTKDALAIE GSDSPYVNIL VARPDNKDSD AMQKLAKALH SAEVKQFIQE KYKGAVVPAF
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