| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_72540 |
|---|
| Symbol | |
|---|
| ID | 4383618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6462110 |
|---|
| End bp | 6464314 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639328445 |
|---|
| Product | putative ribonucleotide reductase |
|---|
| Protein accession | YP_793974 |
|---|
| Protein GI | 116053647 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGTA CGGTGGCCGG CTTCGGACGC CCCAACAACC ATCGGGAGGT TAATCAGCGG
ATGGCCAAGA CAGACGCACG CAGTCCCCGC ACCGAACGCG GGACCATCGC CCTGCAGGAC
GCGTCGCAGG ATATCTGGGA CAAGAAGTAC CGGCTCAAGA GCAAGGACGG TACGCCGGTG
GATGCCAGCG TCGACGGTAC CTGGCAACGC GTCGCCCGCG CCCTTGCCGA TGTCGAGGAC
AAGGCCTCCC GCGAACACTG GTACGGGCGC TTCCTCTGGG CCCTGCGCAA CGGCGCCATC
CCGGCCGGCC GGATCATTTC CAATGCCGGC GCCCTGGGGC ACAAGCCGGC CACCTCGACC
ATCAACTGCA CGGTGTCCGG GACCATCCAG GACTCCATGG ACAACATCCT CGAGAAAGTC
CACGAGGCCG GCCTGACGCT CAAGGCCGGC TGCGGCATCG GCTATGAGTT CAGCACCCTG
CGCCCGCGCG GCGCCTACGT TTCCGGTGCC GGTGCCTACA CCAGCGGGCC GCTGTCGTTC
ATGGACATCT ACGACAAGAT GTGCTTCACC GTCAGCTCCG CCGGCGGCCG CCGCGGCGCG
CAGATGGGCA CCTTCGATGT CAGCCACCCG GACGTCCGCG AATTCATCCG CGCCAAGCGC
GAGGACGGGC GCTTGCGCCA GTTCAACCTG AGCCTGCTGA TCACCGACCA GTTCATGCAG
GCGGTGGAAC AGGACGCCGA CTGGCCGCTG GTATTCCCGG TGCACGTGAA GGAGCGCGAC
GAGATCGACC TCGACGACCC CAACGCGGTG GTCTGGCGCG AATGGCCGAT CCAGGACGAC
TACGTCCAGC GCGCCGACGG GCTGGTCGCC TGCAAGGTCT ACGGCCAGGT CCGCGCCCGT
CACCTGTGGG ACATGATCAT GGTCTCCACC TACGACTATG CGGAGCCGGG CTTCATCCTC
ATCGACCGGG TCAACGAACT GAACAACAAC TGGTGGTGCG AGGCGATCCG CGCCACCAAC
CCCTGCGGCG AGCAACCACT GCCGCCGTAT GGCTCGTGCC TGCTCGGTTC GGTCAACCTC
ACCTGCTTCG TCGAGCAGCC ATTTGGCGAC GAGGCGCGCT TCGACTGGGA CCGTTTCCGC
GAAGTGGTGC GGGTGTTTAC CCGGATGCTC GACAACGTGG TGGAAATCAA CGGCCTGCCG
CTGGAACAGC AACGCCAGGA AATCCTTGGC AAGCGCCGGC ATGGCATGGG CTTCCTCGGC
CTGGGCTCGA CCCTGACCCT GCTCAAGCTG CGCTACGGCA GTCCCGAGGC CTGCGTATTC
ACCGAGGAAG TGGCGCGGGA AATGGCCCTG GTGGGCTGGG AAGTGGCCCT GGAGCTGGCC
AGGGAGAAGG GCCCGGCGCC GATCCTGGCG CAGGACTACG AAGTCACCGC GGAAATGCTT
CGCAAGCGTC CGGAAATGGC CGCCGATGGC TATAAGGCCG GCGACCGCAT CCGCGGCAGC
GTGCTTCACG CCAAGTATTC CCGCTACATG CAACGGGTCG CCGAACATGC TCCGGAACTG
ATCGAGGCGT TGGCTGAAAC CGGCGCGCGC TTCACCCACC ACAGCTCCAT CGCGCCGACC
GGGACCATCA GCCTGAGCCT GGCCAACAAT GCCTCCAACG GTATCGAGCC GAGCTTCGCC
CACCATTATT CGCGCAACCT TATCCGCGAA GGCCGCAAGA CCAAGGAAAA GGTAGAGGTC
TACAGCTACG AGCTGCTGGC CTACCGGACT CTGGTCAACG CCCAGGCCCT GCCGGACAGC
GACGACCCGG CGCGACGCCT GCCGGACTAC TTCATCACCG CCGACAGCGT CACCCCGGCG
CAGCACGTGG ACATCCAGGC GGCGGCGCAG AAGTGGGTCG ATTCGTCGAT CTCCAAGACC
GCCAACGTGC CCACCGACTA CCCGTTCGAG GACTTCAAGG ACATCTATCG CTACGCCTGG
CACCAGGGAC TCAAGGGCTG CACCACCTTC CGCTTCAATC CCGAGGCGTT CCAGGGCGTG
CTGGTCAAGG AGTCCGACCT GGAGAAGACC CGCTACCGCT TCGAACTGGA GGACGGCAGC
GTGGTGGAGT TCAAGGGCAA CGAGCAGGTC GAGTACGACG GTGAGATCCA TACCGCCGCC
AACCTCTTCG ACGCCTTGAA AGAAGGCTAT TACGGCAAGT ACTGA
|
|---|
| Protein sequence | MLRTVAGFGR PNNHREVNQR MAKTDARSPR TERGTIALQD ASQDIWDKKY RLKSKDGTPV
DASVDGTWQR VARALADVED KASREHWYGR FLWALRNGAI PAGRIISNAG ALGHKPATST
INCTVSGTIQ DSMDNILEKV HEAGLTLKAG CGIGYEFSTL RPRGAYVSGA GAYTSGPLSF
MDIYDKMCFT VSSAGGRRGA QMGTFDVSHP DVREFIRAKR EDGRLRQFNL SLLITDQFMQ
AVEQDADWPL VFPVHVKERD EIDLDDPNAV VWREWPIQDD YVQRADGLVA CKVYGQVRAR
HLWDMIMVST YDYAEPGFIL IDRVNELNNN WWCEAIRATN PCGEQPLPPY GSCLLGSVNL
TCFVEQPFGD EARFDWDRFR EVVRVFTRML DNVVEINGLP LEQQRQEILG KRRHGMGFLG
LGSTLTLLKL RYGSPEACVF TEEVAREMAL VGWEVALELA REKGPAPILA QDYEVTAEML
RKRPEMAADG YKAGDRIRGS VLHAKYSRYM QRVAEHAPEL IEALAETGAR FTHHSSIAPT
GTISLSLANN ASNGIEPSFA HHYSRNLIRE GRKTKEKVEV YSYELLAYRT LVNAQALPDS
DDPARRLPDY FITADSVTPA QHVDIQAAAQ KWVDSSISKT ANVPTDYPFE DFKDIYRYAW
HQGLKGCTTF RFNPEAFQGV LVKESDLEKT RYRFELEDGS VVEFKGNEQV EYDGEIHTAA
NLFDALKEGY YGKY
|
|---|
| |