Gene PA14_72400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_72400 
Symbol 
ID4385154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6449427 
End bp6450206 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID639328433 
Productputative N-acetylmuramoyl-L-alanine amidase family protein 
Protein accessionYP_793962 
Protein GI116053635 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.219939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGT TCGTTCTACT GGCTTTCACC CTGTCGCTGC TGGCCGGCTG CTCCAGCGGC 
CCGCGCCTGA ATACCGACTA CACCTCGGCG AACCAGGACA GCCGTGTCCA GTTCATCGTC
CTCCACTACA CCTCCACCGA TCTGCCGCAT TCGCTGGGCA TCCTCACCCA CGGTGGCGTC
AGCGCGCACT ACCTGATCGG CGACGACGAG CCGGCCACCG TCTACCGCCT GGTGGATGAG
AACCGCCGCG CCTGGCACGC CGGGGTCAGT GAATGGCAGG GCCGGACCTG GCTGAACGCC
ACCTCGATCG GCATCGAGAT CGTCAACCAG GGCTATCGCG ATACACCCCA GGGGCGGGTC
TGGTATCCGT TCAGCGAAGC GCAGATCCAG GCGCTGATCC CCCTGCTGAA GGACATCGCC
AAGCGCCACG GCATCACCCC GGACCGGATC ATCGGACACA GCGATATCGC GCCGGGCCGC
AAGGTCGATC CGGGTCCGCT GTTCCCCTGG AAGCGCCTCG CCGACGCCGG CCTGGTGCCC
TGGCCGAAGC CCGGCGAATT GGCGCGCCGG CTCGCCGAAC TGAACGGCCA GCTGCCGGAT
GTGCGCTGGT TCCAGCAGCA GTTGGCGCGG CACGGTTACC TGGTGCCGCA GACCGGCGAG
CTGGAGAAGG ACACCCGCGA CGTCATCGGC GCTTTCCAGA TGAAATACCG TCCGGCCCGC
TTCGATGGCG AGCCGGACCT GGAAACCGCC GCCCTGCTGC TGGCGGTGCC GACTTCCTGA
 
Protein sequence
MRSFVLLAFT LSLLAGCSSG PRLNTDYTSA NQDSRVQFIV LHYTSTDLPH SLGILTHGGV 
SAHYLIGDDE PATVYRLVDE NRRAWHAGVS EWQGRTWLNA TSIGIEIVNQ GYRDTPQGRV
WYPFSEAQIQ ALIPLLKDIA KRHGITPDRI IGHSDIAPGR KVDPGPLFPW KRLADAGLVP
WPKPGELARR LAELNGQLPD VRWFQQQLAR HGYLVPQTGE LEKDTRDVIG AFQMKYRPAR
FDGEPDLETA ALLLAVPTS