Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_71990 |
Symbol | gmd |
ID | 4384948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6416029 |
End bp | 6417000 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639328401 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_793930 |
Protein GI | 116053603 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGAA GTGCACTGGT AACTGGGATC ACCGGTCAGG ACGGAGCGTA CCTGGCCAAG CTGCTGCTGG AGAAGGGCTA CCGGGTCCAC GGCCTGGTGG CGCGGCGCAG CAGCGACACG CGCTGGCGCC TGCGTGAACT GGGGATCGAA GGCGATATCC AGTACGAGGA CGGCGACATG GCCGATGCCT GTTCGGTGCA GCGCGCGGTG ATCAAGGCGC AGCCGCAGGA GGTCTACAAC CTGGCGGCAC AGAGCTTCGT CGGGGCTTCC TGGAACCAGC CGGTGACCAC CGGCGTCGTC GACGGCCTGG GCGTGACCCA CCTGCTCGAG GCGATCCGCC AGTTCAGCCC GGAAACGCGC TTCTACCAGG CCTCCACCAG CGAGATGTTC GGCCTGATCC AGGCCGAGCG CCAGGACGAG AACACGCCGT TCTACCCGCG CAGCCCCTAC GGCGTGGCCA AGCTCTATGG CCACTGGATC ACCGTCAACT ATCGCGAGAG CTTCGGCCTG CACGCCTCCA GCGGCATCCT GTTCAACCAC GAATCGCCGC TGCGCGGCAT CGAGTTCGTC ACGCGCAAGG TTACCGACGC GGTGGCCCGC ATCAAGCTCG GCAAGCAGCA GGAATTGCGC CTGGGCAACG TCGACGCCAA GCGCGACTGG GGCTTTGCCG GGGACTACGT CGAAGCCATG TGGCTGATGT TGCAGCAGGA CAAGGCCGAC GACTACGTGG TGGCCACCGG TGTCACTACC ACCGTGCGCG ACATGTGCCA GATCGCTTTC GAGCATGTGG GCCTGGACTA CCGCGACTTC CTCAAGATCG ACCCGGCGTT CTTCCGGCCC GCCGAGGTCG ACGTGCTGCT GGGTAATCCG GCCAAGGCCC AGCGTGTGCT CGGCTGGAAG CCCAGGACCA GCCTGGACGA GCTGATCCGG ATGATGGTCG AGGCGGACCT GCGACGCGTT TCCCGGGAGT AA
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Protein sequence | MTRSALVTGI TGQDGAYLAK LLLEKGYRVH GLVARRSSDT RWRLRELGIE GDIQYEDGDM ADACSVQRAV IKAQPQEVYN LAAQSFVGAS WNQPVTTGVV DGLGVTHLLE AIRQFSPETR FYQASTSEMF GLIQAERQDE NTPFYPRSPY GVAKLYGHWI TVNYRESFGL HASSGILFNH ESPLRGIEFV TRKVTDAVAR IKLGKQQELR LGNVDAKRDW GFAGDYVEAM WLMLQQDKAD DYVVATGVTT TVRDMCQIAF EHVGLDYRDF LKIDPAFFRP AEVDVLLGNP AKAQRVLGWK PRTSLDELIR MMVEADLRRV SRE
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