| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_71780 |
|---|
| Symbol | |
|---|
| ID | 4385028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6394095 |
|---|
| End bp | 6394976 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639328385 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_793914 |
|---|
| Protein GI | 116053587 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTGC TGCAGCACAT AGCCCAGTCC CGCCAACAGC TCCGCAAGTC GGAACTCAAG
GTCGCCGATC ACGTTCTCAA CGATCCGGCG TCGGTCATGC ACAGCTCCAT GGCCGAACTG
GCCCATGGGG TCGGGGTCAG CGAGCCGACC ATCGTGCGTT TCTGCCGCGC CATCGGCTGC
AGCGGCTTCC AGGACCTCAA GCTGAAGCTG GCGCAGAGCC TGGCGGCCGG CGCCAGCTTC
GGCCAGTTCT CGATCCACGA GAGCGACTCG GTGGCCGACT TCAGCCTGAA GATCTTCGAC
ACCACGCTGC ACAGCCTGAT GGAAGTCCGC GAGCACCTGG ACACCCACGC CCTGGAGCGC
GCCATCGCCG CCATCGCCCA CGCCCAGCGC GTGGAGTTCT ACGGCTTCGG CGCTTCCGGC
GCGGTGGCCT CGGATGCCCA GCACAAGTTC TTCCGCCTGC TGCTGTCGGC GGCGGCCTAC
TCCGACCCGC ACATGCAGGC GATGTCGGCG GTGACCCTCA AGCCCAGCGA CGTGGCCATC
TGCATTTCCC AGTCGGGTCG CTCGAAGGAC CTGCTGATCA CCGCCAACCT GGTCCGCGAG
GCCGGCGCCA CGCTGATCAC CCTGTGCCCG AGCCAGACCC CGCTGGCCGA CCTGGCCACG
GTCAACCTGG CGATCGACGT GCACGAGGAC ACCGACATCT ACACCCCGCT GACCTCGCGC
ATCGCCCACC TGGTGGTGAT CGACGTGCTG GCGATGGGCG TGGCCATGGC CCGCGGCCCG
GACCTGGTCA ACCACCTCAA GAGCGTCAAG CGCAGCCTGC GCAGCCTGCG CCTGTCGCCG
AAGGTGATGA AGAACCAGGA AGAGCGCGGC GAGCCGTCCT GA
|
|---|
| Protein sequence | MNLLQHIAQS RQQLRKSELK VADHVLNDPA SVMHSSMAEL AHGVGVSEPT IVRFCRAIGC
SGFQDLKLKL AQSLAAGASF GQFSIHESDS VADFSLKIFD TTLHSLMEVR EHLDTHALER
AIAAIAHAQR VEFYGFGASG AVASDAQHKF FRLLLSAAAY SDPHMQAMSA VTLKPSDVAI
CISQSGRSKD LLITANLVRE AGATLITLCP SQTPLADLAT VNLAIDVHED TDIYTPLTSR
IAHLVVIDVL AMGVAMARGP DLVNHLKSVK RSLRSLRLSP KVMKNQEERG EPS
|
|---|
| |