Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_71160 |
Symbol | |
ID | 4384977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6338774 |
End bp | 6339712 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639328333 |
Product | hypothetical protein |
Protein accession | YP_793862 |
Protein GI | 116053535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGA CGATTCGCCA GCTGGGCTGC GCCCTGCTGA TCCTGGCCAG TGGCGCCGCC CTGGCCGCAG AACCCGAGCA GTGCCGTACG GTGCGCCTGG GCACGGTGAA CTGGACCGAC GTGGTCGCCA GCAGCGCCGT GGCCGAAGCC TTGCTCGATG GCCTGGGCTA CCAGGTGAAG CAGACCAGCG CCTCGCAACA GATCGTTTTG GCCGGCCTGG CCGACAAGCA GCTGGACCTG TTCCTCGGCT ACTGGCAACC GACCATGCAG CCGGTCGCCA GGCCTTACCT GGACAAAGGC CGGATCGAAG TGATCGAGCC ACCGACCCTG GCCGACGCGC AGTCCACCTA TGCGGTGCCG AGCTACGTCG CCGAGGGCGG GCTGAAGACC TTCGCCGACA TCGCCCGCTT CAAGGACAAG CTTGGCGGCC GCATCTACGC CATCGAGCCG GGCAGCGGCT CGAACCGCAT CACCCGGAAG ATGATCGACG ACAACCGTTT CGGCCTGAAG GGCTTCCAAC TGGTGGAGTC CAGCGAGGCC GGGATGCTCA CGGCGGTGAA GCGGGCGATC AAGCGCAAGC AGTGGGTGGT GTTCTTCGGC TGGAAGCCGC ATCCGATGAA CCTGCAGATC GACATGACCT ACCTCACCGG CAGCGAGGAT GTGTTCGGTC CCGACGAGGG CGCGGCCACC GTCTCCACCA TGACCGCCGC CGGCTACCAG GCGCAGTGCG GCAACGTCGC CCGGCTGCTG CACAACCTGC GCTTCAGCAG CGCCCAGGTC AGCCAGGTGA TGGCGCCGAT CCTCGATCGC ACCCAGCCCC TCGACGCCGC GCGCCAGTGG CTGAAGGCCA ACCCCGAGCC GCTGAAGGCC TGGCTGGATG GCGTGAGCAC CTTCGACGGC AAGGACGGCC TGGCCGCGCT CCAGGCCTCG CTGAAGTAA
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Protein sequence | MKTTIRQLGC ALLILASGAA LAAEPEQCRT VRLGTVNWTD VVASSAVAEA LLDGLGYQVK QTSASQQIVL AGLADKQLDL FLGYWQPTMQ PVARPYLDKG RIEVIEPPTL ADAQSTYAVP SYVAEGGLKT FADIARFKDK LGGRIYAIEP GSGSNRITRK MIDDNRFGLK GFQLVESSEA GMLTAVKRAI KRKQWVVFFG WKPHPMNLQI DMTYLTGSED VFGPDEGAAT VSTMTAAGYQ AQCGNVARLL HNLRFSSAQV SQVMAPILDR TQPLDAARQW LKANPEPLKA WLDGVSTFDG KDGLAALQAS LK
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