Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_70690 |
Symbol | glcD |
ID | 4385255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6295122 |
End bp | 6296621 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639328295 |
Product | glycolate oxidase subunit GlcD |
Protein accession | YP_793829 |
Protein GI | 116053502 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCC TCTACGACGA GCGTCTGGAC GGTCCGCTGC CGCAGGTGGA CAAGGATGGC CTGCTGGCCG AGTTGCGCCT CCGCCTGCCC GACCTCGAAC TGCTGCACGC CGCGGAAGAC CTGCGTCCCT ACGAGTGCGA CGGACTCTCG GCGTATCGCT GCACGCCGTT GCTGGTGGCA TTGCCGGAAC GCATCGAACA GGTTCAGGGC CTGCTCGCCC TCTGCCATCG GCTGAAGGTG CCGGTCGTGG CGCGCGGTGC CGGCACCGGC CTGTCCGGCG GCGCGCTGCC GCTGGAGAAC GGCGTGCTGC TGGTGATGGC GCGTTTCCGG CGGATCCTCG AGATCGATCC GCTGGGTCGT TTCGCCCGGG TCCAGCCTGG CGTGCGCAAC CTGGCGATCT CCCAGGCCGC TGCCCCTCAT GGTCTGTACT ACGCACCGGA CCCGTCCTCG CAGATCGCCT GCTCCATCGG CGGCAATGTC GCGGAGAACG CCGGCGGCGT GCATTGCCTG AAGTACGGCC TGACCGTGCA CAACCTGTTG CAGGTGGACA TCGTGACCCT GGAAGGCGAG CGCCTGAGCC TGGGGTCCAG CGCCCTGGAC AGCGCCGGCT TCGACCTGCT GGCGCTGTTC ACCGGCTCCG AAGGGCTGCT CGGCGTGGTG GTGGAGGTCA CCGTCAGGCT GTTGCCGCGC CCGCCGGTGG CGAAGGTCCT GCTGGCCAGC TTCGACGATG TGGAAAGCGC CGGGCGGGCG GTGGCCGACC TGATCGGTGC CGGCATCGTC CCGGCCGGGC TGGAAATGAT GGACAACCTG TCGATCCGCG CCGCCGAGGA CTTCATCCAT GCCGGCTATC CGGTCGACGC GGCGGCGATC CTGCTCTGCG AACTGGATGG CGTGGAAGCC GACGTGCACG AGGATTGCGA GCGGGTCCGC GAGCTGTTCG AGGCGGCTGG CGCCACATCG GTGCGACAGG CCCAAGACGA GGCCGAGCGC CAGCGCTTCT GGGCCGGGCG CAAGAATGCG TTTCCGGCGG TCGGGCGGAT TTCCCCCGAT TACTACTGCA TGGACGGCAG CATCCCGCGC CGCGAGCTGC CGCGGGTGCT GCATGGCATC GCCGAGCTTT CGCGCGAATA CGGCCTGCGG GTGGCCAACG TATTCCACGC CGGCGACGGC AACATGCACC CGCTGATCCT CTTCGACGCC AACCTGCCGG GCGAGCTGGA GCGCGCCGAA GCGCTGGGCG GCAGGATCCT CGAGTTGTGC GTGGCGGTAG GCGGCAGCAT CACCGGCGAA CATGGCGTCG GCCGCGAGAA GATCAACCAG ATGTGCGCTC AGTTCAATGC CGACGAGCTG ACCCTGTTCC ACGCCGTGAA GGCGGCGTTC GACCCGGCCG GGCTGCTCAA TCCCGGCAAG AACGTGCCCA CCCTGCATCG CTGCGCCGAG TTCGGCGCCA TGCACGTCCA CCACGGTCGA CTGCCGTTCC CCGAACTGGA GCGTTTCTGA
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Protein sequence | MNILYDERLD GPLPQVDKDG LLAELRLRLP DLELLHAAED LRPYECDGLS AYRCTPLLVA LPERIEQVQG LLALCHRLKV PVVARGAGTG LSGGALPLEN GVLLVMARFR RILEIDPLGR FARVQPGVRN LAISQAAAPH GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL QVDIVTLEGE RLSLGSSALD SAGFDLLALF TGSEGLLGVV VEVTVRLLPR PPVAKVLLAS FDDVESAGRA VADLIGAGIV PAGLEMMDNL SIRAAEDFIH AGYPVDAAAI LLCELDGVEA DVHEDCERVR ELFEAAGATS VRQAQDEAER QRFWAGRKNA FPAVGRISPD YYCMDGSIPR RELPRVLHGI AELSREYGLR VANVFHAGDG NMHPLILFDA NLPGELERAE ALGGRILELC VAVGGSITGE HGVGREKINQ MCAQFNADEL TLFHAVKAAF DPAGLLNPGK NVPTLHRCAE FGAMHVHHGR LPFPELERF
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