| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_68920 |
|---|
| Symbol | |
|---|
| ID | 4385392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6147866 |
|---|
| End bp | 6148780 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639328156 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_793690 |
|---|
| Protein GI | 116053366 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.196948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACC TACGCCGCCT GCGCTGCTTC GCAGCCGTTG CCGAAACCCT GCATTTCGGC
CGCGCCGCCC AGCGCCTGCA CATGGCGCAG CCGCCCTTGA CCCGGCAGAT ATCCGCGCTG
GAGGAAGAGC TGGGCTTTCG CCTGTTCGAC CGCTCCAGCC GGGCGGTGAC CCTCACCGCC
GAGGGCAGCC TGTTCCTGCC TTACGCACGC GGCCTGCTGG ACCAACTGGA GCGCACCGCC
GGCTTCGCCC GCAAGCTGGC GCAGGGGCTG GCCGGCCACC TGACCCTCGG CTACGCCAGC
TCCATCGCCC TGTCGGACCT GTTCACCGAG GCGATCCGAC TGTTCCGCGA GCGCCATCCG
GAGGTGCAAC TGGAGCTGCT CGAAGGCGCT TCGGCAGCGC AATGGGCGCA GATCGCCGAA
GGCGGCATCG ATGTGGGGCT GGGGCGCCTG CCGCCGCCGG AAGGCCAGGT CGGCATCGAG
GTGCTGGCCT TGGGCGGCGA GCCGCTGGTG GTGGCCGTGC CCAACGGCGA TCCGCTGGCG
CGGCAAGAGC GGATCGACCT GTACGATCTG CGTGATCGGC CGCTGATCCT GTTTCCGCTG
GACTACGGCT CCGGCCTCAA CGAACTGATT GAGCGCCTCT ACCGGAAGGC CGGGCTGGCG
CTGACGAGGG GACCGGCCGG ACGCCAGATC ACCTCGATCA TCGCCCTGGT CGCGGCCGGC
CAGGGCGTTG CCCTGGTGCC GCGTTGCAGC ACCGCGCTGG CCCGGGCCGG AGTCGTCTAT
CGCCCGCTGG CCGAGCCCGA GGCGCTGGCC GATTTCCTCG TCTTCACCCG CCGCCATGGC
CGCAGCGCCG CGGTGGAGGC GTTTCTCGCC ATCCTCGGCG GCCTGGACGC AGGCGAAACA
CCCCGACACA TTTAG
|
|---|
| Protein sequence | MLDLRRLRCF AAVAETLHFG RAAQRLHMAQ PPLTRQISAL EEELGFRLFD RSSRAVTLTA
EGSLFLPYAR GLLDQLERTA GFARKLAQGL AGHLTLGYAS SIALSDLFTE AIRLFRERHP
EVQLELLEGA SAAQWAQIAE GGIDVGLGRL PPPEGQVGIE VLALGGEPLV VAVPNGDPLA
RQERIDLYDL RDRPLILFPL DYGSGLNELI ERLYRKAGLA LTRGPAGRQI TSIIALVAAG
QGVALVPRCS TALARAGVVY RPLAEPEALA DFLVFTRRHG RSAAVEAFLA ILGGLDAGET
PRHI
|
|---|
| |