Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_68400 |
Symbol | |
ID | 4384399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6102527 |
End bp | 6102964 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639328115 |
Product | LysM domain/BON superfamily protein |
Protein accession | YP_793649 |
Protein GI | 116053325 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.00863438 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.536726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATTT TCGCGTTCGT GAAGGAAGCC GGTGAAAAGC TGTGGGATAC GCTGACGGGG CATGAGGCAC AGGCGGCCGA GTCGCTGAAG GAGCACGTCG CCAAGGTCGG CCTGGGCAAC CCGAACATCC AGGTTTCGGT GGAAGGCGAC AAGGTCATCG CCTCGGGCGA GGTGGCCAGC CAGGAGGAGA AAGAGAAGAT CCTGCTGGCG CTGGGCAACG TCGCCGGCGT CTCCTCGGTG GAAGACAAGA TCACCGTGGC CCAGGCCGCT CCGGAGGCGC GCTTCGTCAC CGTGAAGAAA GGCGACACCC TGAGCGCCAT CGCCAAGGCC GAATACGGCA ATGCCAACGC CTACATGAAG ATCTTCGAGG CCAACAAGCC GATGCTCAGC CATCCGGACA AGATCTACCC CGGCCAGGTC CTGCGCATTC CCGAGTGA
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Protein sequence | MGIFAFVKEA GEKLWDTLTG HEAQAAESLK EHVAKVGLGN PNIQVSVEGD KVIASGEVAS QEEKEKILLA LGNVAGVSSV EDKITVAQAA PEARFVTVKK GDTLSAIAKA EYGNANAYMK IFEANKPMLS HPDKIYPGQV LRIPE
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